Gene Sbal_1196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal_1196 
Symbol 
ID4844021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS155 
KingdomBacteria 
Replicon accessionNC_009052 
Strand+ 
Start bp1378319 
End bp1378945 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content48% 
IMG OID640118415 
Productanti sigma-E protein, RseA 
Protein accessionYP_001049583 
Protein GI126173434 
COG category[T] Signal transduction mechanisms 
COG ID[COG3073] Negative regulator of sigma E activity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.000269656 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAAAT TAGGTCAAGA ATGGGTATCT GCCGCAGTCG ATGGAGAGAC TGATGCGCAG 
ACCATGGCAG AGTTATCTGC TGATACACAT TCACATGATA AATGGCATAA CTATCATATG 
ATAGGCGATG CCATGCGTGG CGAGTTGCCG CAGAATATTG TGTTAGATCT CTCTGCTAGC 
ATTGCCGCCG CCATTGAGCT TGAGCCAGCT ATAGTTGCGC CTAAGCATCA TGCGTCTAAC 
GTTGCTGCAC CTGTAACCCC GCAAATTGCC GCCAATGCGC AGCAAAACCG CGTCGTACCT 
TTGTTTAAGC AATTTGGCCA ATATGCCATT GCTGCGACGG TTGCTATGTT TGCGATTGTC 
GGTGTGCAGA ATTACAATCA GAGCGCCGAT GATGCCGCGT CACCATCGCC CGTATTGATT 
ACCAGACCGC TAATTGGTAG CGCATCACCT GTGAGCCTAC AAACGGGTCC AGTTCAACAG 
AATCAAGGTT ATACCAATGA TCAGGTGAAC GAGCAGCGTC GCCGAATTAA TACTTATATT 
CAAGATCATA TGTTGCAACA ACGATTGAAT ACCGGTGCGG TTGTAGAGGA CAATACCGAG 
GTCGTACCCG TTCCGGTCAA TCAATAA
 
Protein sequence
MDKLGQEWVS AAVDGETDAQ TMAELSADTH SHDKWHNYHM IGDAMRGELP QNIVLDLSAS 
IAAAIELEPA IVAPKHHASN VAAPVTPQIA ANAQQNRVVP LFKQFGQYAI AATVAMFAIV 
GVQNYNQSAD DAASPSPVLI TRPLIGSASP VSLQTGPVQQ NQGYTNDQVN EQRRRINTYI 
QDHMLQQRLN TGAVVEDNTE VVPVPVNQ