Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_1161 |
Symbol | |
ID | 4841374 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | - |
Start bp | 1340519 |
End bp | 1342243 |
Gene Length | 1725 bp |
Protein Length | 574 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640118381 |
Product | chloride channel core |
Protein accession | YP_001049549 |
Protein GI | 126173400 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0038] Chloride channel protein EriC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.541504 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCAATTAA CGATAAATAA AGTCGCTATT CAACATGCCA TAGTCACAGC CAAAAAGTAT TTAACCAATG AGCTACGTGA CCATTTATCC CAAGCGAGGA TCAGTGCACA ACTGTGCATA CTGGCACTGC TGTTTGCCAT TTTCGCATCC TGCGTGATCT TACTGTTTCG ACTCTTGCTC GTTTGGGCCA ATCATTACAC CCAAATACAG GCGCTGGATT TTACGGGGAA CGTCGCCGAC TGGCGAGCCC TGTTACCACT TTTAGGCGCA ATATTAATTT GGATTGTGGC TAAGCTAGGC TCCAAACGCT ATAAACGTAT GGGAATAGCC TATGTGTTAC ATAGAGTTAA ACTGCACTAC GGTAAAATTC CGCTGCAATC TGCCGTAGGG CAATTTTTTC AAGCACTATT CGCCCTCGGC ACCAATTTCT CCGTCGGCCG TGAAGGTCCA GCCATTCATC TGGGTGCTGT CAGTGCCAGT TTTCTCGCCG AAAAATTCAA TCTTCCCGAT AACAGTGTGC GCATTATGTG CGCCAGTGGC ATTGCCGCAG GGATTGCCGC GACCTTTAAC GCGCCCTTGG CGGCAGTGAT TTTTGTACTC GAAGTGATTG TCCGCGAATA TAAAGTCCAT TACTTCTTCC CGATTATGCT CTCCGCGATT TGTGGCGCGG TTTCAAGCCA ACTGGTGTTT GGTAATGTGC ACGAATTTGA CCGTATTCAA GTGATCCACA TTCCCTTAGA TCACTACCCT ATTCTCGCCA TCGGCGGCGT GGTATTAGGC TGCGCTGCGG CGCTGTTTAA TTACTCACTC TTAAAAGTCA CCGCGACGGG GCAAAACTGG CCACTCATCT ACCGACTATT ATTGGCGGGC AGTGTCACCA CACTAATCGG TCTCGTGTTG CCGCAAGCCC TTGGCACTGG CGATCTCGCC ATTAGCGAAG CCATTAGCCA ACATCCAAGC CTGTTGCTGT TAATCGCCCT GTTATTTGCC AAAATCATTG CCACTATTGC GGCGATTGGC TTAGGTATTC CAGGTGGTTT GATTGGTCCA CTCTATGGTA TCGGCGCGCT GCTCGGCGCG ATTTTGGCGC TGATCAGTGC CATCTTATTC CCGTCCATCG CCCCTTATGT AGGGCTTTAC ACTGTGATCG GCATGACAGC CATGATGGGC GTGTGCTTAA GCGCGCCGCT GGCGGCGTTA GTCGCCCTGC TAGAAATGAC CAATGATGCC AGTATCATCC TGCCGGCGAT GTTTGTGACT ATTCCCGCAT TTTTGATTGC CTATCAAGGC TTTAAGACTA ACTCTATTTT CTTTAAACAA TTAGAAATCA TGGGGCTAGG CTATAAAGTT GCGCCAGTAA ATTTAGCGCT GCAGAAAAAA GGCGTGCGAG CCTTGATGGA TAAACGCTTT GTTATCGTCA ATAACAACGA TGAATTGTTA CTCGAAGTGC TTAAACGGGC CGAAGGTCGA CCTGTGCTGG TTCGCAATGC CGATGGTGTT ATCGAAATGC TCAGCCTTGA AATGCAATCC TACGATGACA GTACCACGCT ATCGCGCCAT CCCATGCAAG GCTTAAGCGA CAGCACTACG CTCAATGAGG CCTATTTACT CTTGTCACCC AAGCGCAGCG GTGAGGTGTT TATCTATCAA GATACGCCCG ATAACGTGGT CGGAGTGATC AGTTGGTCGA ACCTGCAACA GGAAATTCGC TTAGGCCAAG CCTAA
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Protein sequence | MQLTINKVAI QHAIVTAKKY LTNELRDHLS QARISAQLCI LALLFAIFAS CVILLFRLLL VWANHYTQIQ ALDFTGNVAD WRALLPLLGA ILIWIVAKLG SKRYKRMGIA YVLHRVKLHY GKIPLQSAVG QFFQALFALG TNFSVGREGP AIHLGAVSAS FLAEKFNLPD NSVRIMCASG IAAGIAATFN APLAAVIFVL EVIVREYKVH YFFPIMLSAI CGAVSSQLVF GNVHEFDRIQ VIHIPLDHYP ILAIGGVVLG CAAALFNYSL LKVTATGQNW PLIYRLLLAG SVTTLIGLVL PQALGTGDLA ISEAISQHPS LLLLIALLFA KIIATIAAIG LGIPGGLIGP LYGIGALLGA ILALISAILF PSIAPYVGLY TVIGMTAMMG VCLSAPLAAL VALLEMTNDA SIILPAMFVT IPAFLIAYQG FKTNSIFFKQ LEIMGLGYKV APVNLALQKK GVRALMDKRF VIVNNNDELL LEVLKRAEGR PVLVRNADGV IEMLSLEMQS YDDSTTLSRH PMQGLSDSTT LNEAYLLLSP KRSGEVFIYQ DTPDNVVGVI SWSNLQQEIR LGQA
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