Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_1064 |
Symbol | |
ID | 4845610 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | - |
Start bp | 1225843 |
End bp | 1226337 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640118288 |
Product | type IV pilus biogenesis protein, putative |
Protein accession | YP_001049457 |
Protein GI | 126173308 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4970] Tfp pilus assembly protein FimT |
TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAGTCA TCTCAAAAGG GTTCACATTA GTAGAACTGA TGGTAACGAT CGCTGTCGCG GCAATTTTGT TAGCAATAGG CGTTCCATCA CTTACGTCAC TATACGAAGG GACACGCAGC ACTAATGAAA TACGAAAAAT TAGCGATGTG TTTGCCTTTG CAAGAAATCA AGCCGTCAAT TATGGTGCCA CGGTTACTGT TTGCCCATAC GCAGCATCTC CATGCGGTAC TGACTGGAAT AAAGGATTCA GTGTTTATAT TGATAATGGA GGAGCAAAAA ATGTACTCAA AGTAATTGAT AGTTTTAATG AGCATGATGT CATTTCACTA TCGGGGCCAG CAGATAAAAA AGTGGACTTC ACACCAGATG GCTTAGTATC AGTCGAAACA TCAATAATTT ATTGTTCAAA CGGGAAAAGT GACGGTTCTA AAAGCCTTAA GATTAGTACT TCAGGTTTGA TAAGAGAAGG CGCAGATGGG CAAAGCTGCA CATAG
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Protein sequence | MLVISKGFTL VELMVTIAVA AILLAIGVPS LTSLYEGTRS TNEIRKISDV FAFARNQAVN YGATVTVCPY AASPCGTDWN KGFSVYIDNG GAKNVLKVID SFNEHDVISL SGPADKKVDF TPDGLVSVET SIIYCSNGKS DGSKSLKIST SGLIREGADG QSCT
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