| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_1038 |
|---|
| Symbol | |
|---|
| ID | 4841413 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | + |
|---|
| Start bp | 1195310 |
|---|
| End bp | 1197238 |
|---|
| Gene Length | 1929 bp |
|---|
| Protein Length | 642 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640118262 |
|---|
| Product | von Willebrand factor type A |
|---|
| Protein accession | YP_001049431 |
|---|
| Protein GI | 126173282 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2304] Uncharacterized protein containing a von Willebrand factor type A (vWA) domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGGCCG TTTACAGCTT TAGGTCAACA TCAAAGGCAT TCAACATGAA AACACAATAT
TCCCCAAAAA CTGTTTCAGT TTCCGATCCA ACTCTCTACC TGCAACGGGG AAACGGTATC
CCATCGGCGA GCAATACGGC TGCTCTATTA CTGGTCGCAG TGAGTTTAAC GGCCTGTGGT
GGTAAAGGCG CCGAAGTTGA ACATCGACAA GCTGAGCAGC AAGCCGAGCA ACGTCATCAA
GTAGCGTCGC AGCGCCAAGC TGAAATGCGT GATGCCGCTA AGGTTGAGAT GGCGAGAGTG
GCGGCGCCGA TGCAAATGTC TAGCAATGGG GCTGTGATGG GGATGAGCAT AGCGCCAATG
CCGCGTGACT ATGCCGCGAT TCCGTTAGCG CAAAATAAAT TCGAGCAGCA AGTGCAAAAT
GGCATCATGG TGGCAGGGGA GATCCCTGTA TCGACGTTTT TCATCGATGT CGATACTGGC
AGTTATGCCA CCTTAAGACG GATGTTGAGG GAAGGGCGCT TACCCGAGAA AGGCACTGTC
AGAGTTGAGG AAATGCTCAA TTATTTTGCC TACGATTATC CCTTACCCGC TAAAAACGCG
GCACCGTTTA GCGTGACGAC AGAGCTTGCT CCCTCACCCT ATAACGATGA CATGATGCTG
CTGCGGATTG GCCTTAAAGG TTATGACTTA CCTAAATCTC AATTAGGCGC GAGTAACTTA
GTCTTTTTAC TCGATGTGTC AGGCTCTATG GCGTCAGCGG ATAAATTGCC TTTACTGCAA
ACGGCGTTAA AGCTGCTAAC AGCGCAATTA AGTGCGCAGG ATAAAGTCTC TATTGTGGTT
TATGCTGGGG CTGCTGGTGT GGTGCTCGAT GGCGTGTCGG GGAACGACAC TCAAACCTTG
ACCTATGCGT TAGAACAATT AAGTGCCGGT GGTTCAATCA ATGGTGGGCA AGGGATCACG
CAAGCCTATC AATTGGCCAA AAAGCATTTT ATCCCTAATG GCATAAATCG AGTCATCCTC
GCGACCGATG GCGATTTTAA TGTTGGCGTG ACAGATTTTG ATGATTTGAT TGCCTTGATT
GAAAAGGAAA AAGATCATGG TATTGGCCTA ACGACCTTAG GGTTTGGTTT GGGCAATTAT
AACGATCAAC TGATGGAGCA ATTGGCGGAC AAGGGCAATG GCAACTATGC CTATATTGAT
ACGCTGAATG AAGCGCGAAA AGTGCTGGTG GACGAGTTGA GTTCGACCTT ATTTACTATC
GCCAAAGATG TAAAAGTGCA GGTGGAGTTT AATCCGGCCT TAGTCTCGGA ATACCGTTTG
ATTGGCTATG AGAATCGCGC CTTAGCACGG GAAGATTTTA ATAACTATAA GGTGGATGCG
GGCGAGATTG GCGCGGGTCA TACAGTAACA GCCTTGTATG AATTAAGGTA CGTTGAAGCC
GGGAATAGGA TGAATGATAA ACTTAGATAT GGCGTTGATG CTCAAACGGG GAAAGAGAAA
TACAGCCGTA AAGAAATTGC TTTCCTTAAA TTGAGATACA AGTTGCCAGC ACAAACGCAG
AGCCAATTAC TAAGTTATCC CATCAGGTTA GATCAAAGCG TTAAACAGCT CGAGCAAGCA
AGTGATGATT TTAGATTTGC CGCCGCTGTT GCAGGGCTAG GACAATTACT GAATGGCAGT
CACTATCTAC ATCAATTTGA TTATACTAAG TTAAGCTTAC TCGCACGTTC AGCATTAGGG
GATGATCCCT TTGGTTATCG CCATGAGTTT GTGCAGTTAA TGGAAACCGC AGCGGCGATA
GAGCAATCTA ATCAGCTGCC AATTAAGAAA GCATTCGATG GCTCGGATAA ACCTTTTCCT
CCCCAAGATA AACTCCATGG CGAGCCAATG AGAGATAAGA GCAATCCGCG TAATGAGAGA
TTACAATAG
|
|---|
| Protein sequence | MRAVYSFRST SKAFNMKTQY SPKTVSVSDP TLYLQRGNGI PSASNTAALL LVAVSLTACG
GKGAEVEHRQ AEQQAEQRHQ VASQRQAEMR DAAKVEMARV AAPMQMSSNG AVMGMSIAPM
PRDYAAIPLA QNKFEQQVQN GIMVAGEIPV STFFIDVDTG SYATLRRMLR EGRLPEKGTV
RVEEMLNYFA YDYPLPAKNA APFSVTTELA PSPYNDDMML LRIGLKGYDL PKSQLGASNL
VFLLDVSGSM ASADKLPLLQ TALKLLTAQL SAQDKVSIVV YAGAAGVVLD GVSGNDTQTL
TYALEQLSAG GSINGGQGIT QAYQLAKKHF IPNGINRVIL ATDGDFNVGV TDFDDLIALI
EKEKDHGIGL TTLGFGLGNY NDQLMEQLAD KGNGNYAYID TLNEARKVLV DELSSTLFTI
AKDVKVQVEF NPALVSEYRL IGYENRALAR EDFNNYKVDA GEIGAGHTVT ALYELRYVEA
GNRMNDKLRY GVDAQTGKEK YSRKEIAFLK LRYKLPAQTQ SQLLSYPIRL DQSVKQLEQA
SDDFRFAAAV AGLGQLLNGS HYLHQFDYTK LSLLARSALG DDPFGYRHEF VQLMETAAAI
EQSNQLPIKK AFDGSDKPFP PQDKLHGEPM RDKSNPRNER LQ
|
|---|
| |