Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_1017 |
Symbol | |
ID | 4845158 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | + |
Start bp | 1162133 |
End bp | 1163107 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640118238 |
Product | RluA family pseudouridine synthase |
Protein accession | YP_001049410 |
Protein GI | 126173261 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000495395 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACAAG AGATTAATCT AAAAAGCGAG ATTTCGGCAA CACAAACTGG ACTGAGATTA GATCAGGCCC TAGCAGAGTT GTTCCCAGAT TACTCGCGCA CGCGCATCAA GGAATGGATC CTATCTGATG CAGTTCATGT TGACGGCGTT GTCGTTAATA AGCCCCGCGA GAAAGTTTAT GAGCTGCAAC AGATACTCAT AGACGCCACT CTCGAAGAAG AAGTCCATGC CGCGGCGCAG GCCATTGATC TGGATATCGT CTATGAAGAT GACGACATTA TCGTGATCAA CAAGCAAGCT GGATTGGTGG TTCACCCAGG TGCTGGCAAT GCAGATGGCA CTTTGATGAA TGCACTATTG CACCATTGTC CTGATATTGA GCATGTGCCA CGTGCGGGTA TTGTGCATCG TCTGGACAAA GATACAACAG GTTTGATGGT CGTTGCCAAA ACCGTTGAAG CGCAAACGCA TTTAGTTGCC GCTTTGCAGG CCCGTGAAAT CACTCGTGAA TACGAAGCGA TTGTTATGGG GACTATGACT GGTGGCGGTA CTGTGGATGA GCCGATTGGT CGTCATCTTA CTAAACGTAC TCACATGGCC GTGCTGCACT CAGGTAAACC TGCGGTGACG CATTACCGTG TCGCGGAAAA ATTCCGTAAC CACACGCGTT TGAGATTACG TCTAGAATCT GGCCGTACTC ACCAGATCCG TGTGCACATG GAATACATAG GCCACGTGTT AGTGGGCGAT CCTGTGTATG GTGGTCGTCC AAAACCGCCT AAAGCCGCGA GCCCAGAGTT TTTCGATATC CTGAAAAACT TCAAGCGCCA AGCGCTGCAC GCAGTTCGTC TAGAATTAGC TCACCCAGTG AGTTGTGAAA TCATGAGCTG GCAAGCGCCA ATTCCTGAAG ACATGGTGAT TTTGACTAAA GCACTGCGTC AAGACACGGT AGAGCATCCG ATCGAGTATC TCTAA
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Protein sequence | MTQEINLKSE ISATQTGLRL DQALAELFPD YSRTRIKEWI LSDAVHVDGV VVNKPREKVY ELQQILIDAT LEEEVHAAAQ AIDLDIVYED DDIIVINKQA GLVVHPGAGN ADGTLMNALL HHCPDIEHVP RAGIVHRLDK DTTGLMVVAK TVEAQTHLVA ALQAREITRE YEAIVMGTMT GGGTVDEPIG RHLTKRTHMA VLHSGKPAVT HYRVAEKFRN HTRLRLRLES GRTHQIRVHM EYIGHVLVGD PVYGGRPKPP KAASPEFFDI LKNFKRQALH AVRLELAHPV SCEIMSWQAP IPEDMVILTK ALRQDTVEHP IEYL
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