| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_1013 |
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| Symbol | |
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| ID | 4844070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | + |
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| Start bp | 1156488 |
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| End bp | 1157258 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640118231 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001049406 |
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| Protein GI | 126173257 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.163733 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCGAA CTTGCATCCT GCTAGAATGG CTATCTCATT CATATTTCGT CATTTGTGGT
GTTATGCAAT CTAAGCGCGG CCGACTCGAT CGTTATCTTT GTAGCCAGTT ACACACTCAC
CGTAAAGCGG TGCGTGAACT GCTATTATCG GGCCGAGTGT GCGTCGATGG ATTGATAGTG
AAGGACATGG ATAGGCAAGT GGATGAGTTT TCCCGCATCC AACTCGATGA GCAAATACTG
CAGGCCAATG CGCCCGTCTA TGTGATGCTC CACAAGCCGA TAGGTGTAGT AAGTGCCACC
AAAGATACTC AGCATAAAAC TGTGATTGAT TTGCTTGATT GCGAAGCCCG TGATGAGTTG
CATATCGCCG GCAGATTAGA TTTAAACTCT TCGGGTTTGT TGTTATTGAC CAATGACAGC
CGCTGGTCTG ATGCGTTGAT GTCACCTACA CACAAGGTCG ACAAAGTGTA TCGGGTTACC
TTAGCGAATC CCATAACCGA AGAATACATC GCTGCATTTG CCGAAGGGAT GTATTTTGGC
TTTGAAGATA TTACAACCCA ACCCGCTAAG CTGGTTATAC TCGCTGATAA CGTGGCTGAA
GTGACTTTAC ATGAAGGTAA GTATCATCAA ATCAAGCGGA TGTTTGGTCG GTTCCGCAAT
CCGGTTGTTG GCCTGCATCG ATTATCGATA GGCGATATTG TGCTTGATGA AAAGTTGGCA
CCGGGTGAAA GTCGCGCTCT CACTGTCGCT GAAGTGGCCT CTATCCGTTA A
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| Protein sequence | MSRTCILLEW LSHSYFVICG VMQSKRGRLD RYLCSQLHTH RKAVRELLLS GRVCVDGLIV
KDMDRQVDEF SRIQLDEQIL QANAPVYVML HKPIGVVSAT KDTQHKTVID LLDCEARDEL
HIAGRLDLNS SGLLLLTNDS RWSDALMSPT HKVDKVYRVT LANPITEEYI AAFAEGMYFG
FEDITTQPAK LVILADNVAE VTLHEGKYHQ IKRMFGRFRN PVVGLHRLSI GDIVLDEKLA
PGESRALTVA EVASIR
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