| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_0977 |
|---|
| Symbol | ksgA |
|---|
| ID | 4844189 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | - |
|---|
| Start bp | 1119612 |
|---|
| End bp | 1120418 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640118195 |
|---|
| Product | dimethyladenosine transferase |
|---|
| Protein accession | YP_001049370 |
|---|
| Protein GI | 126173221 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
|---|
| TIGRFAM ID | [TIGR00755] dimethyladenosine transferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0224326 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAACA AAGTACATTT AGGCCACACG GCCAGAAAGC GTTTCGGACA AAACTTCCTT
ACCGACGGCA ATGTGATTGA TCGCATTGTG GGCGCAATTT CCCCCGATAA TCACCATGTG
ATGGTCGAGA TCGGCCCAGG CCTTGGTGCC TTAACCGAAC CCGTAGCCGA AGCTGTAGAT
AACCTGACCG TCGTCGAACT TGACCGCGAT CTAGTTGAAC GCTTACATCA TCACCCAGTC
CTTAAAGATA AACTGACCAT TCACCAAGGT GATGCACTGC AGTTTGATTT TGGTCAACTG
AGTGTGCCTG GCAAAAAGAT GAAAGTGTTT GGTAACTTAC CTTACAACAT TTCAACGCCG
CTGATGTTCC ACCTGTTCGA ATTTGCCGAA CAGATTGAAA CCATGCACTT TATGCTGCAA
AAAGAAGTGG TACTGCGTTT ATCGGCAAGC CCAGGCTGTA AAGCCTATGG CCGTTTAACG
GTAATGGCGC AATACTTCTG CCAAGTGGTT CCGGTTCTTG AAGTGCCGCC CCACAGCTTT
ACGCCCGCGC CTAAGGTCGA CTCAGCAGTC GTACGCTTAT TGCCATACGC TGTAAAGCCG
TTCCCTTGCA AAGATGTGAC CGTACTACGT CACCTTTGTA CTACGGCGTT CAACATGCGT
CGTAAGACTC TGCGTAATAA CTTAAAGCAC ATGTTATCTG ACGATGAGTT CGAGCAATTA
GGGATTGACT CAAGTCAACG TCCAGAGCAG ATTAGCGTGC AACAGTATGT TGCTATGGCT
AACATGGTTT GCGATAAGAA AGCATAA
|
|---|
| Protein sequence | MSNKVHLGHT ARKRFGQNFL TDGNVIDRIV GAISPDNHHV MVEIGPGLGA LTEPVAEAVD
NLTVVELDRD LVERLHHHPV LKDKLTIHQG DALQFDFGQL SVPGKKMKVF GNLPYNISTP
LMFHLFEFAE QIETMHFMLQ KEVVLRLSAS PGCKAYGRLT VMAQYFCQVV PVLEVPPHSF
TPAPKVDSAV VRLLPYAVKP FPCKDVTVLR HLCTTAFNMR RKTLRNNLKH MLSDDEFEQL
GIDSSQRPEQ ISVQQYVAMA NMVCDKKA
|
|---|
| |