Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_0923 |
Symbol | |
ID | 4843773 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | + |
Start bp | 1060171 |
End bp | 1062225 |
Gene Length | 2055 bp |
Protein Length | 684 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640118142 |
Product | TonB-dependent receptor |
Protein accession | YP_001049317 |
Protein GI | 126173168 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4772] Outer membrane receptor for Fe3+-dicitrate |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.854225 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCTAGTC GTTACTTCAC AGTATCACTC TGTGCAATTT CTGTATCTCT TGCCTGTTCT AACACAACGT TCGCCGATGA TTTCCACAGT CAAATGCTTG AACTGAACCA GCTCAATGAC ACATTCCACT CCACTGCTGA CAGCTTAGCA TTAGGCCAGT TAACGGCTTT GACGGTTTTA CCTGCGGATC TTAACGGAAA TCCAGCAAGC ATTAGTATGC GCAGCGCGAG TCAAGGCGTG GCCGTATTGC AAGATAGAGT GTATTTCTCA CCTGCGCCTT ATTCTGCACC GCAATTACAA CTATTACCCA ATCTACTGCA ACAACAGAGT GTCACTGTCA CGCCAATGGC GAATATGGCG GTTGGTGGGC AAGGGGCGTT TGGGGTGGTG AGTTATCAAA CCTTACCTGT GGCCGAGCAA GCGGAAAACA GTAAAGTGAC ACTCGAAGGC AATACCGACT CAGACTACAG TGTCGATGTG AATTGGGGCG TGAAGCAAAA AGAATACGGC ATGATACTCG CGGTTAACTA CAGTGATGGT AGCGGTGCCG ATCACTTACT CAATGGTCAA GATACTGACC GCCAAACCAC TGATATCTTA TTTAAAATCA ATGCTGCGAG TTTATTAGGT GCCCGAAGTC CGCAGGTGAC TGAGTTTACC TACCAGTTCC TCGATGATGA TAGCTATCGC TCCCAACTCG GCTTAACGCA GGCCGATTGG CAACAAGACC CGATGAGTTT GTATTCGGCC ACGGCGGCAG ATAAGCATCA AGGGCGACAC CATAAGTATC AACTGTCGCA CCAAGTTGCG CTTAGTGGTG GGCATAAGGT CATCACGGAC TTTTACTATC AATCCTATTC GCAGCAATTA AATCAACTCA ATCAATTTGA TGGGCAAATG CTCGATACCC AGAGTTTAGC GGTGCTGGCC GCATTTGAAC GGCAGCCGAC TGTCGATGGC GTCGCGGTCG CCTCGTTACA ACAAGACAAT GATTTCAGCT CCTTTGGGGT ACAAACTGAG TCCGTGAATC AGTATGGCGC CCATCAAATT AGCTATAGCG CTCGTTATCA TACGGATAAA GCCGAGATGC ACCTTGGCGA TCAGCAGAGT CTATGGCAGC AGGACTTGAG TGTAGTGAGT GATGCACCCA ATGCGCTGTT GGCTTATACC GATGATGCGA CCGCATTCAC CTCGGCCATC GATTCCTTGT TTAATTGGGA CGGATTGCAG CTCAAACTCG CGCTTGCCTA TGAAAAAGTG GATGTTAATC GCAAGGTCAA TTTAGCTTAC GCCGGACTCG AAGCGGCAGA TTTTTCCGAC AGCGATTGGA TGCCACAACT TGGCGTTTTA TATCATGCTG GAGATTGGCG CTTTAGTACG GATATTCGAC GTTCATGGAC CGCCGCGAGT GCGGGGAATC TTGAGCAAGA GGCGCAAGTG TCGCTGCAAT ATCAAGTCAG CGCCCAATAT GCCAGCGAGC ATTTTAGTGC TGACATCAAA ACCTACGTCC AAGATTTTGA TAATCTGCAT GTCAATTGTG ATGCGTATAC CCAATGTGCC GACAGTCGTT TGTGGGTTCA AGGCAATGTC GTGGATGTGC TGACCAAAGG GGTTGAGCTG AATCTTGGCT ATCAATGGGA ACTGGGCAGT GTGCAGTTAC CTTTAGCCTT GAATTATCAG TATTCAAATG CCGAGTATCA AACCAATAGC TGCAACGAAA TCCAAGGCTG TGTTGTGGCT GGCGATAGGG TGGCCTGGTT ACCCGAGCAG CAACTGCAGT TGAGTGCTGG GATGAAATAC GCCGAATATG AACTGCATGC GAATGTCTTT TATCAATCGG AGCGCGAAAT GGGCCAATTC GGCGCCGAAT TACAGCCTGT CGCCGCACAA TGGCGGGTAG ATTTAGCGGC GAATTATCAT TTTAACCGTC ACCATGAGAT TTATTTTCGG ATAGAAAACC TCTTAGATGA GACATTAGTC ACAACAGCAT CAAATAGCGG AATTCGATCG GAAAATGGAC GTATTAGCTA TTTAGGTTAT CAATGGCGCT TTTAA
|
Protein sequence | MPSRYFTVSL CAISVSLACS NTTFADDFHS QMLELNQLND TFHSTADSLA LGQLTALTVL PADLNGNPAS ISMRSASQGV AVLQDRVYFS PAPYSAPQLQ LLPNLLQQQS VTVTPMANMA VGGQGAFGVV SYQTLPVAEQ AENSKVTLEG NTDSDYSVDV NWGVKQKEYG MILAVNYSDG SGADHLLNGQ DTDRQTTDIL FKINAASLLG ARSPQVTEFT YQFLDDDSYR SQLGLTQADW QQDPMSLYSA TAADKHQGRH HKYQLSHQVA LSGGHKVITD FYYQSYSQQL NQLNQFDGQM LDTQSLAVLA AFERQPTVDG VAVASLQQDN DFSSFGVQTE SVNQYGAHQI SYSARYHTDK AEMHLGDQQS LWQQDLSVVS DAPNALLAYT DDATAFTSAI DSLFNWDGLQ LKLALAYEKV DVNRKVNLAY AGLEAADFSD SDWMPQLGVL YHAGDWRFST DIRRSWTAAS AGNLEQEAQV SLQYQVSAQY ASEHFSADIK TYVQDFDNLH VNCDAYTQCA DSRLWVQGNV VDVLTKGVEL NLGYQWELGS VQLPLALNYQ YSNAEYQTNS CNEIQGCVVA GDRVAWLPEQ QLQLSAGMKY AEYELHANVF YQSEREMGQF GAELQPVAAQ WRVDLAANYH FNRHHEIYFR IENLLDETLV TTASNSGIRS ENGRISYLGY QWRF
|
| |