| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_0890 |
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| Symbol | |
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| ID | 4843388 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | + |
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| Start bp | 1015475 |
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| End bp | 1018087 |
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| Gene Length | 2613 bp |
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| Protein Length | 870 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640118109 |
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| Product | endonuclease/exonuclease/phosphatase |
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| Protein accession | YP_001049284 |
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| Protein GI | 126173135 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2374] Predicted extracellular nuclease |
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| TIGRFAM ID | [TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.298934 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAATG TTAATAAGTT AACGGCGATT TCTTTAGCTG TCGCAGCGGC TTTGCCTATG
ATGGCAAGCG CAGATGTGAT GATTACCGAA TATGTTGAAG GTAGCGCAAA CAATAAAGCG
ATTGAACTCT ATAACAGCGG CGATACGGCA ATTGATCTCG CGGGTTATAA ACTGGTTCGT
TATAAAGATG GGGCAACTAT TGCATCAGAT ATGGTGGCAT TAGATGGCCA ATCGATTGCA
CCTAAAGCGA CAAAAGTCAT TTTAAATTCT AGCGCTGTGA TCACGCTTGC CCAAGGCGTT
GACAGTTACT CTGGCAGTTT AAGTTTTAAT GGTGGTGATG CGGTCGCACT CGTTAAAGAT
GATGCGGTTG TCGATATTAT TGGCGATGTG CCAACACCAA CGGGTTGGGG ATTAGACGTT
ACCTTAAAAC GTAAATTAGA TGCGTTAGTG GCGAATACGG TATTTAACGC CGCCCAGTGG
GAACAATTAC CTAAAGATAC CTTCTCAGGA TTAGGTTCAC TAGAAACGCC CGCTGAGCCA
GAAGTGCCGC TCTTTAGCTG CAGCGGCGCT AAAATAGTGC CGATTTATCA AGTGCAAGGT
GCGGGTGAGT CTAGCCCTTA CGTTCCAGAA GGTGCATTTG AGTCTGAAGC TGAAGTCACA
GTGCGCGGTA TAGTGACAGC CCGCGGCGAA AGCTTGTTTA AAGGTTTTTA TCTACAAGAA
GTGAAAGGTG ATAACTCACC GTATACCTCT GATGGTGTGT TTGTATTCTT AGGTGAAGCG
GTACCTGAAG CGATTCAACC TGGGGTTGAA GTTTGTGTAC AAGGTAAAGT GAAAGAATAT
TTTGGCTTAA CTCAAATCGA TATTAAAGCC GATAAGAAAT TTGAAGTCGG CGCTAAGGGT
GAAGTCCCAG TTGCTGCGCC TTTCTATGTC GCCGATGGTG AAACCTTAGC CCAAGCATTA
GAGCGTTATG AAGGCATGAA TGTGGCTTTA GATGCGGGCA GCGATCTTAA GATCAGCCGT
ACCTTCAGCT ATGATTACGC TGGCCGTCGC AACAACATGT TAGTGTCTTA TAAAGAACCG
CTAATGAAGT CGACACAGCT TTATCCCGCG CTTTCTGCTG AAGCGACTGC GTTAGTTAAA
TCTAACCTCG AAAACCAACT CTTTATCGAA TCTGATTACA AACCTGCCGA CGGTGTTATT
CCATACTTCC CTGATTTCAA TGTGGAAACG GGCTACATCC GTGTGGGCGA CCAACTGACG
AACCTGCAAG GTGTGATTGG TTACAGCTAC GGCGCTTATC GTTTAGTGGC AACTAATACT
ATTACTGCGG GTGATTTTAT CCGTGGTGAT GACAGAACTG ATGCCCCAAG CGTCGCAACT
AAGGGCGATC TGCGTGTGGC TAGCTTTAAC GTGCTGAACT TCTTTAACGA TGTTGATGGT
GGTGATACCA ATCCATCAGG TAGTAACCGT GGCGCGCTAA CGCTGGAAGA AATGGTGCTA
CAACGCACTA AAATCGTTAG CGCTATTACT GCCATGAACG CCGATATCGT CGGTCTGATG
GAAATTGCCA ACAACGGTTT TGGTGAGAAG AGTGCGATTA AAAACTTAGT CGATGCACTG
AACGAGAAGC AAACGCCTGA AAACGCTTAT AGCTTTGTTG AAATCACCTA CGCCGACAAG
TATGACGGCA AGTATTTTGG CACGGATGCT ATCACTGTGG GCATGTTATA CCGTGGCGGC
AAAGTGACCT TAGCTGGTGC TGCTCAAGCT ATCGAGACTC CTGAGCAACA TGCCAGTGCT
GGCAGCGTGA CTCGTACTAA AGATGGCAAA ACTGAGACAA ATCCAGGTAA CGATGCTTAC
CAACGTCACA GCTTAGCGCA AACCTTTAAA ATCCATGATG AGTCGCTGAC CGTAGTCGTT
AACCATTTGA AATCTAAAGG CTCAGGCTGT TTAGAAGATT GGGCTAACTT TGAAGAGTCA
GTCGATCCTG CCGATCAACA GGGCAAGTGT AATGCTTTCC GCGTATCTGC TGCCAAAGTC
TTGGGTGAAA TGCTAAAAGA CGTGAAGGGC GACTTACTGA TCATCGGTGA TATGAATGCC
TACGGCATGG AAGATCCTAT CCGTGTGCTG ACCGACTTTG ATGCGAGCAA GTCAGATCGT
GACATCATGA CCGCTTCGTG GACGACGCTC GATGGCAAAG TATTTGAACG CCAAGGTAGC
AAGATTGAAA AAGGCTATGG CCTGATCAAC TTGAACACGA AAGCCCACGG TGCAGGCACT
TACTCTTACA GCTATAACGG CGAGCTAGGC AACTTAGACC ACGCTTTAGC CAATGCTAGC
TTAGCCAAAC GTTTAGTGGA TATTGAAGAT TGGCACATCA ACTCAGTGGA ATCTAACCTG
TTTGAATACG GTAAGAAGTT CTCTGGTGAT CTGGCTAAAT CTGAAAATGC GTTCTCTGCA
TCGGACCACG ATCCTGTGAT CGTTGCCTTA AGCTACCCAG CGCCAGTAGT GCCACCAAAA
CCTGAGCCAA CGCCTAAAGA TGATGGCGGT GCTTTGGGTT ATTTAGGTTT AGTACTGATG
TCCTTGTTTG GTTTACAACG TCGTCGCCGT TAA
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| Protein sequence | MDNVNKLTAI SLAVAAALPM MASADVMITE YVEGSANNKA IELYNSGDTA IDLAGYKLVR
YKDGATIASD MVALDGQSIA PKATKVILNS SAVITLAQGV DSYSGSLSFN GGDAVALVKD
DAVVDIIGDV PTPTGWGLDV TLKRKLDALV ANTVFNAAQW EQLPKDTFSG LGSLETPAEP
EVPLFSCSGA KIVPIYQVQG AGESSPYVPE GAFESEAEVT VRGIVTARGE SLFKGFYLQE
VKGDNSPYTS DGVFVFLGEA VPEAIQPGVE VCVQGKVKEY FGLTQIDIKA DKKFEVGAKG
EVPVAAPFYV ADGETLAQAL ERYEGMNVAL DAGSDLKISR TFSYDYAGRR NNMLVSYKEP
LMKSTQLYPA LSAEATALVK SNLENQLFIE SDYKPADGVI PYFPDFNVET GYIRVGDQLT
NLQGVIGYSY GAYRLVATNT ITAGDFIRGD DRTDAPSVAT KGDLRVASFN VLNFFNDVDG
GDTNPSGSNR GALTLEEMVL QRTKIVSAIT AMNADIVGLM EIANNGFGEK SAIKNLVDAL
NEKQTPENAY SFVEITYADK YDGKYFGTDA ITVGMLYRGG KVTLAGAAQA IETPEQHASA
GSVTRTKDGK TETNPGNDAY QRHSLAQTFK IHDESLTVVV NHLKSKGSGC LEDWANFEES
VDPADQQGKC NAFRVSAAKV LGEMLKDVKG DLLIIGDMNA YGMEDPIRVL TDFDASKSDR
DIMTASWTTL DGKVFERQGS KIEKGYGLIN LNTKAHGAGT YSYSYNGELG NLDHALANAS
LAKRLVDIED WHINSVESNL FEYGKKFSGD LAKSENAFSA SDHDPVIVAL SYPAPVVPPK
PEPTPKDDGG ALGYLGLVLM SLFGLQRRRR
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