| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_0881 |
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| Symbol | |
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| ID | 4843956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | + |
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| Start bp | 1003173 |
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| End bp | 1004669 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640118100 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_001049275 |
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| Protein GI | 126173126 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATAATG ATGGCTACAC TTCCCTAAGC AATTTTATCG ACCTTCTCTT GGATGCTATT
TGCGTCGTCG ATAAAGCTGG GCGGTTTGAA TTTGTCAGTG CCGGGGCAGA ACGCATTTTT
GGCTATCCCC CAGAAGAAAT GATTGGCATG CAGATGCTCG ATCTTGTTAT TCCTGAGGAT
AGAGAGCGCA CACTCGCAAC CGCCAATGAG ATTATGACTG GCCGCTATAA GGTCGATTTC
GAAAACCGTT ATGTGCGTAA AGACGGCGTA ATTGTCGATA TTTTGTGGTC CGCACGCTGG
TCCGATGCTT ACCAACAACG CGTCGCGGTC GCCAGAGATA TCTCTAAGAG TAAAAACGCC
GAACGCAGAC AAGCTGCCCT GTATGAGATT TCTGAAGCTG TGCATGTCGC TGAGGACTTG
CTAGCCCTAT ATCGCCGTAT CCATGAAATC ATTGCTAAAT TGCTGCCCGC GGCAAACTTT
GCCATCGCAT TGTACGATCA AGATTTAAAT GAACTCAGTT TCCCCTATAA AGCCGCTGCG
GGTGATAATT CACTGGTCGA TATCGCAAGT TTCAGCCTGT TCACCGAACA AGTGATCCAC
AGTGCAGAAT CCTTACTCCT GTGTCCCGTG ACCTTATCTG AGTATCCCCA AGCCATTCGT
GAAGAGCTGG GTAATGGCAA TTTAAGTTGG TTGGGTGTGC CGCTAAAGCT GCAAAAAGGC
GTTATCGGTG CCTTGATGAT GCATAGCTTG CCCACTTCGG CTTCTTATAC GCACCAAGAC
CGTGAGCTAT TGGAGTTTGT TTCTACGCAA ATTGCCTTTG CGATTGAACG CCGACAAATG
CTTGCGCGAT TAGAGCATAT TGCGCTGTAT GATCAGCTAA CCCTGTTGCC CAATCGCGAG
CTTTTTTACG ACAGGTTTCA AAAGGCGCTA TCCCGAGCCC ATAGGGAATC AAGTTATTTC
TCTTTACTTT ATTTAGACTT AGATAAGTTT AAGTGGGTGA ACGATACCTT TGGTCATAGT
GTGGGCGATT TATTGCTGCA AGTGACAGCG CAACGTATTG TCAGTTGTGT AAGGGGCTCT
GATACCGTAG CCCGTTTTGG GGGCGACGAG TTTGTCATCT TACTTGAGCG CGTTGATTCG
GCACAAAATA CCCTGTTGGC TGCACAAAAA ATATTACAAG TGCTCAATCA ACCCTTTGAG
CTTACCGATC AGCAAATCCA TATTTTACCG AGTATCGGTA TTGCCCTGTA TCCAGAGCAC
GGCACGGACG AAAAACAGTT ACTTTCCTGT GCGGATGCGG CCATGTATAA GGCTAAGAAA
AATGGGGGCA ATCGCATTGA AATGGGCTAT CAAGGGCTGA GAAACCTGCA TGCAGATCCT
CTGACTGCGG CTCCTGAGTT AAAGAGCGCT GAGTTAAAAG ACACTGAGCT AGAAGACCGT
GAATTAAAAG ACACTGAGTT AAATAACCTT GAAAACAAGG TGACTAAGAT AGTGTGA
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| Protein sequence | MNNDGYTSLS NFIDLLLDAI CVVDKAGRFE FVSAGAERIF GYPPEEMIGM QMLDLVIPED
RERTLATANE IMTGRYKVDF ENRYVRKDGV IVDILWSARW SDAYQQRVAV ARDISKSKNA
ERRQAALYEI SEAVHVAEDL LALYRRIHEI IAKLLPAANF AIALYDQDLN ELSFPYKAAA
GDNSLVDIAS FSLFTEQVIH SAESLLLCPV TLSEYPQAIR EELGNGNLSW LGVPLKLQKG
VIGALMMHSL PTSASYTHQD RELLEFVSTQ IAFAIERRQM LARLEHIALY DQLTLLPNRE
LFYDRFQKAL SRAHRESSYF SLLYLDLDKF KWVNDTFGHS VGDLLLQVTA QRIVSCVRGS
DTVARFGGDE FVILLERVDS AQNTLLAAQK ILQVLNQPFE LTDQQIHILP SIGIALYPEH
GTDEKQLLSC ADAAMYKAKK NGGNRIEMGY QGLRNLHADP LTAAPELKSA ELKDTELEDR
ELKDTELNNL ENKVTKIV
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