| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_0871 |
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| Symbol | |
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| ID | 4843689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | - |
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| Start bp | 984061 |
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| End bp | 988338 |
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| Gene Length | 4278 bp |
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| Protein Length | 1425 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640118090 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_001049265 |
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| Protein GI | 126173116 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases
[COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.510403 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAGAAC TTCGAATTGA TGACCAAGTG TTGTCGGTTA ATCCGACCGA TAACCTACTG
CAAGTGGCGC ATGCTGCTGG CATAGCAATA CCCAGCTTAT GTGATCCCAG CGCAGCCTCG
CAGCAATTAG GCACTCATGC ACACTCTCAT GCAGACGCAG ATAAGCAAGC CTGCAATTTG
TGTGTCATCC AAATTGAAAA TGCCGACGCC AGTTTGCGCT GCGTACGCGC CTGCGAAACG
CCGGTCGCAG CGGGCATGCG GGTGATAACT CAGTCCGAAT GGTTAAGTCA ACAGCGCAAA
CAAGCACTGA CAGCGATCTT GAGCGATCAC TTCGCCGATT GTGAAGCCCC CTGCCAACAG
GCATGCCCTG CGGGCGTCGA TGTGCAGAGT TACCTGTATC ACATCGCCCA AGGCAACCAT
ACTGAAGCCG TTAAAGTCAT TAAACAAACC TTGCCGCTAC CACTGTCTAT TGGCCGAGTT
TGCCCCGCTT TTTGTGAGGC ACAATGTCGC CGCGGACTGG TCGATGAGCC CATCGCCATT
CGTCAACTCA AACGCCACGC CGCCGATCTC GATCTCGCCG ATGGCGAAAA GGGCGGCACG
AGTTATGTGC CGCCACGCCA AGCCGACACG GGCAAAAAAG TCGCGATTAT TGGGGCGGGC
CCAGCAGGAT TAAGTGCAGG ATATTACTTA TCAAACCAAG GCCATAGCGT TGAGATATTC
GAAGCTATGC CACAGGCTGG TGGCTGGCTG CGCTATGGCA TTCCTGAATA TCGTTTACCT
AAGGCGATAC TCGATAAAGA AATCGCACTC TTGTGCCATA ACGGCTTAAC CATACACACA
GAAACGCGCC TCGGCCATGA GGTGCATTTA AATCAATTAG TTGAAGATTT CGATGCCGTT
TGTCTCGCCA TTGGCGCCCA AAAAGCCGTG CCTATGGATT ACCCAGGCAG CACGCTCAAA
GGTTGCTACT TAGGTGTCGA TTACTTAAAA GATCATTGCC TCGACCAGAC ACTTGTACTG
GGCAAAAAAG TCGCCGTCAT TGGTGGCGGT AATACCGCTA TCGATTGCGC CCGCACTGCG
GTGCGTGAAG GCTGCGATGT CACCTTAATT TACCGCCGCA CCCGCGCAGA AATGCCCGCC
GAAGCTTACG AAGTACACGA GGCCGAAGTC GAAGGGGTGA AATTTCATTT TTTAACTAAC
CCAATTGAAA ACCATAGCGA TGCGCAAGGC AGAGTACACG CCGTCACCTT TGCTAAGATG
GCACTCGGCG AAGCCGATGC CTCTGGCAGA CGCGCTCCCG TTGATACCGG TGAAACCTTT
ACCCAAGATT TTGATACTGT AATAGCCGCA GTATCACAAA CTCCCGACCT GAGTTTTATG
CAAGATCCCG CCAGTCCTTT AAGCCAAGGC ACACTTGCCC TTAGCCGCTG GAATACCTTT
ATTGGCTGCG AGCACACTAT GTCATCCGGG GTTGAAAAGC TCTTTGTGGT GGGGGATGCG
CGCCGCGGCC CTGCCACCGC AGTTGCCGCC ATCGGTGATG GCCATAAAGC CGCCATCGCC
ATAGATAAAT TACTCAAAAA AGGCCTAAGT TGCGATCTGC ATGCCAATGC ATTTAATTCC
GCTAAAGCCA TCAGCAAAGC GGTAACACAA GACTTGCCCG CAACCGATTT TTATCCCGCC
GTACCGCGTA AAGCCCGTTT AACCATGCCC GAGCTGAGTG CGGTGCAGCG TTTACTCAAT
TACGGCGAAG TCGAGCTAGG CTTTGCCCCC GATGCCGCGA TGCAAGAAGC GGCGCGATGC
CTTGAATGCG CCTGCCAAGC CAATACGGAT TGTAAGTTAA GGGACTATGC GACCGACTAC
CATGTCGAGC CTAAGTCACT CAACACTCAA AGCGCGCGTA AGTTTTCGGT CGATAAATCG
AGTCCTTTCA TTCAATTTGA TGCGAATCGC TGTATTAGCT GCGGTAAGTG CGTTGATGTG
TGCCAGCTAC AAAGTGGCCA TTGTGCGATT CAATTTGCCC ATGATTCCTA TCAAGCACTG
CCGCAAGACC TAAGCGAAAC CATCGAACGC CGCGCACCGA GAGTCGGCTT TAGCGCCAGC
ATGGCCGACA GCAAATGTGT GCAATGCGGC AACTGTGTAC AAGTTTGTCC AACGGGTGCA
CTCGTCGATG CGCGGGATAA ACGCCAAGGC GATGAAACGC CACTCAAAAC CGCCTCAACG
ATTTGTACCT ATTGCGGCGT AGGCTGTCGG CTCGACCTTA AAATCGATGC CAGCACTAAT
CAGATCCGTC ATATCGAAGG CAACAAAGAG TCTGTGGTTA ACCAAGGCAT GTTATGTGTG
AAAGGCCGGT TTGGCTTCGA TGTTATTCAC AGTGAAAAAC GCCTCACAAC GCCACTAATT
CGTAAAAATG GCCAGCTCAC GCCAAGTAGT TGGCCTGAAG CCATCGCCTA TGTGGCCGAA
CATTTACAGC AAATAAAACA GCAACATGGC AGTAATGCAC TAGCAAGCTT GGCCTCGGCA
AAAGCCACCA ATGAAGAAAA CTTCCTGCTG CAAAAATTTG TCAGAAGCAT ACTCGGCACC
AACAACATCG ACCACTGCGC CCGTCTGTGT CATTCATCTA CGGTAACAGG CCTGCAGCAA
AGTATTGGTA GTGGCGCTAT GACCAATGAC ATTCCGAGCA TTCAAGCATC GGATGTGATT
TTTATCATAG GCTCAGACAC CAGCAGCGCC CACCCGATCA TCGCCTCGAA AATCAAACAA
GCCGTGGCTT TGCATGGCGC GAGACTAATG GTGGCAGATC CTAAACGTGT CGCCATTGCC
GACAGTGCAC AGCTTTATGT CGCCCACAGA CCCGGCACTG ACGTCATGTT ACTCAATGCG
ATTATGGCGG AAATCATCCG CAACGACTGG CAAGATAAAA GCTACATTGC CGCACGCACC
GAAGGCGTGG ATGCTCTCTA TGCTGAACTC GCAAAAGCAG ATTACAGCCT AGAAAACGCG
GCCTTGATAA CCGGCGTTAA AGCCGAAGAT ATCGCCAGCA TTGCCCGCAC CATAGGCACG
GCCGATAAAA CCGCAATCTA CTATGCCATG GGGATCACTC AGCACACGAC GGGACACGAC
AATGTCACAG CCATATCCAA TCTACAACTT CTGTGCGGCA ATATTGGGGT TGAGGGTGCG
GGGATTAACC CACTGCGTGG ACAGAGTAAT GTGCAAGGTG CCTGCGACAT GGGCGCACTA
CCCAACTTCT TCAGTGGCTA CCAAAAAGTC ACTGACATTC ATGCCAGAAT GCGTTTCGAG
GCACATTGGA AAACGCCGTT ATCGGCGGAG ATTGGCGTAA CAGCAACCCA CATGATGCAT
GATATTTCCA AAGGGAAAAT TAAAGCTTTG TATGTAATGG GCGAAAACCC CGTATTGAGC
GATCCTGACC AAGCCCATGT GCTTAGGGCC CTTAACGCTA TCGACTTTTT AGTGGTGCAG
GATATCTTCC TCACCGAAAC CGCCGAGCTT GCCGATGTGG TTCTGCCCGC CGCCGCGTTT
GTCGAAAAAC GCGGTCATTT CACCAATACA GAACGGCGAG TGCAGCGACT CGAACAGGCC
CTGTTACCGC CAGGCGAAGC CCTGCCCGAT TGGCAAATTG TCCAAGCCAT TGCCAATGCG
ATGGGCGCCG CTTGGGATTA CCCCAATGAA GAAGCGATTT GGCAGGAAAT CAATGAGCTA
ACACCACAAT ACCGCGGCAT TACTTGGCAG CGATTAAGCA CTGGAGAAGA CGGTAAAATT
CCCCAAGGCA TTCAATGGCC TTGTCCAGAT GAAACCCATC CTGGAACGCC CATCATGCAC
CAAGGCCAAT TTACCCGCGG CTTAGGCAAG TTCACGCCAG TGAGTTATCG CTTACCCGCG
GAAATGCCCT GCAGTGAGTA CCCGCTCACC CTCTCAACCG GACGTTTACT GGAACAGTTC
CACACAGGCA CCTTAACCCG TAAAACGGCC GGCTTAGACT TACTCGGCTC GCCTAAAGTA
ATGATTTCAG TCTATGACGC TGAGCAACTC GGCATAGGCA ATGGCGATAA AATCAAACTC
ACTACCCGTC GCGGCGAAAT TGAAATCGAC GCCTTTGTGA CGAAAAGAGC GCAAGCTGGC
GTGCTATTCC TGCCCTTCCA TTTTGTTGAG GCTGCTGCGA ATAAACTCAC CATTAATGCG
CTCGACCCTG TGGCCTTTAT CCCAGAATAT AAGGTCTGCT CTGTGAGGGT GGAACGGGTT
GTCGAGAAGA TTGATTAA
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| Protein sequence | MIELRIDDQV LSVNPTDNLL QVAHAAGIAI PSLCDPSAAS QQLGTHAHSH ADADKQACNL
CVIQIENADA SLRCVRACET PVAAGMRVIT QSEWLSQQRK QALTAILSDH FADCEAPCQQ
ACPAGVDVQS YLYHIAQGNH TEAVKVIKQT LPLPLSIGRV CPAFCEAQCR RGLVDEPIAI
RQLKRHAADL DLADGEKGGT SYVPPRQADT GKKVAIIGAG PAGLSAGYYL SNQGHSVEIF
EAMPQAGGWL RYGIPEYRLP KAILDKEIAL LCHNGLTIHT ETRLGHEVHL NQLVEDFDAV
CLAIGAQKAV PMDYPGSTLK GCYLGVDYLK DHCLDQTLVL GKKVAVIGGG NTAIDCARTA
VREGCDVTLI YRRTRAEMPA EAYEVHEAEV EGVKFHFLTN PIENHSDAQG RVHAVTFAKM
ALGEADASGR RAPVDTGETF TQDFDTVIAA VSQTPDLSFM QDPASPLSQG TLALSRWNTF
IGCEHTMSSG VEKLFVVGDA RRGPATAVAA IGDGHKAAIA IDKLLKKGLS CDLHANAFNS
AKAISKAVTQ DLPATDFYPA VPRKARLTMP ELSAVQRLLN YGEVELGFAP DAAMQEAARC
LECACQANTD CKLRDYATDY HVEPKSLNTQ SARKFSVDKS SPFIQFDANR CISCGKCVDV
CQLQSGHCAI QFAHDSYQAL PQDLSETIER RAPRVGFSAS MADSKCVQCG NCVQVCPTGA
LVDARDKRQG DETPLKTAST ICTYCGVGCR LDLKIDASTN QIRHIEGNKE SVVNQGMLCV
KGRFGFDVIH SEKRLTTPLI RKNGQLTPSS WPEAIAYVAE HLQQIKQQHG SNALASLASA
KATNEENFLL QKFVRSILGT NNIDHCARLC HSSTVTGLQQ SIGSGAMTND IPSIQASDVI
FIIGSDTSSA HPIIASKIKQ AVALHGARLM VADPKRVAIA DSAQLYVAHR PGTDVMLLNA
IMAEIIRNDW QDKSYIAART EGVDALYAEL AKADYSLENA ALITGVKAED IASIARTIGT
ADKTAIYYAM GITQHTTGHD NVTAISNLQL LCGNIGVEGA GINPLRGQSN VQGACDMGAL
PNFFSGYQKV TDIHARMRFE AHWKTPLSAE IGVTATHMMH DISKGKIKAL YVMGENPVLS
DPDQAHVLRA LNAIDFLVVQ DIFLTETAEL ADVVLPAAAF VEKRGHFTNT ERRVQRLEQA
LLPPGEALPD WQIVQAIANA MGAAWDYPNE EAIWQEINEL TPQYRGITWQ RLSTGEDGKI
PQGIQWPCPD ETHPGTPIMH QGQFTRGLGK FTPVSYRLPA EMPCSEYPLT LSTGRLLEQF
HTGTLTRKTA GLDLLGSPKV MISVYDAEQL GIGNGDKIKL TTRRGEIEID AFVTKRAQAG
VLFLPFHFVE AAANKLTINA LDPVAFIPEY KVCSVRVERV VEKID
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