Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_0845 |
Symbol | |
ID | 4843188 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | + |
Start bp | 954926 |
End bp | 956659 |
Gene Length | 1734 bp |
Protein Length | 577 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640118064 |
Product | single-stranded-DNA-specific exonuclease RecJ |
Protein accession | YP_001049239 |
Protein GI | 126173090 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGAGTCCCT TGATCCATAA GATAGTCCGT CGCCCAACCG TTGATGATAG CCATTTACCC GCTCATCTTT CGCCGCTATT GAAGCAGCTT TACGCTCGCC GCGGTGCGCT CACCCACGAA TGCGAACTTG TCCTCAAGGG TCTATTAAGA CCTGAAACCA TGAAAGGCCT GCCCGAAGCT GCGGCGCTTA TTGCCGATGC CATGCAGGCG AATAAGTCGA TTTTGATCGT CGGTGATTTT GATGCCGATG GCGCGACCTC AACCAGCGTA TGTATGCTGG CGCTACGGAT GATGGGCGCA GTTAAAGTGG ATTATTTGAT CCCCAATCGC TTCGATTACG GCTACGGCTT AAGCCCTGAA ATTGTTGCGG TTGCGGCGTC TAAACAGGCT GAAATGCTGA TCACTGTCGA TAACGGTATT TCATCGATTG ATGGCGTTGC TGCGGCCAAA GCCTTTGGTA TGCAAGTGGT GATTACTGAC CATCATTTAC CCGGACACGA GTTGCCTGCT GCTGATGCGA TAGTGAATCC GAATCAACCC GATTGCCCCT TTGCGAGTAA ATCGATTGCC GGTGTCGGTG TCGCCTTTTA TTTGATGACG GCATTAAGGG CTGAACTGCG AACGCGAAAC TGGTATCAAA CGCGCGGTAT TGCTGAGCCT AATCTAGGGA CGCTGCTCGA CATTGTTGCC CTAGGTACCG TTGCCGATGT GGTATCACTC GATGCCAATA ATCGCATTTT AGTCGAAGCG GGTTTGCAGC GCGTGCGAGC GGGCCGCTGC CGTGTGGGCA TTACCGCGCT GCTTGAAGTC GCGAAACGCA ACCCCGCGCG TATTGTTGCA TCTGATTTTG GTTTTGCCGT GGGCCCAAGG CTTAATGCCG CAGGCCGGCT GGATGAAATG GCGCTTGGGG TCGAAACCTT ACTCTGTGAA GACATGATGT ACGCGCGGCG TATGGCGGCC GAGCTCGATG GGTTAAACCA AGAGCGTCGT GAGCTGGAAG TCGGCATGCA GCAGGAAGCC TTAAAAAGCC TTGAGCACTT AAAGCTCAAC GAAGACGAGT TACCTTGGGG TATCGCGCTA TTTCAAGAAG ATTGGCACCA AGGCGTCATT GGTATTTTGG CCTCGCGCAT TAAAGACAAA TACCACAGAC CCGTGATCGC CTTTGCCGAT GCGGGCAATG GTCAAATTAA AGGCTCGGCG CGTTCAATCA AAGGCTTGCA TATGCGCGAC TTGCTGGAGC TGGTCAACAC GCGCCACCCA GGATTGATTA TCAAGTTTGG TGGCCATGCG ATGGCGGCGG GCTTATCACT CAAAGCCGGT AGTTTTGCGA CATTTGCCAA AGCCTATGAT GATGCGGTGC GTGAACTGCT CAAACCTGAA CTGCTAACTG GCGAGCTGTG GTCCGATGGT GAACTCACTC CCACTGAACT GAATCTTGAG ATGGCCCAGT TACTGCGCAA TGCTGGGCCT TGGGGACAAG CCTTTGAAGA GCCACTGTTT GATGGCTATT TTACGATAGT GCAGCAACGC CTCGTCGGCG AGCGCCATCT TAAGCTTGTA CTCGAAACCC AGTGCGGCAC TGTGATGCTC GATGCGATTG CTTTTAATGT GGATTTACAC ACTTGGCCCG ATGCGACCAT TCACCATGCT CGTATCGTTT ATAAGCTTGA TGTGAATGAG TATCGAGGTA ATTTCACCTT GCAACTCATG GTTGAGCAGA TTGAAGCCAT GTAG
|
Protein sequence | MSPLIHKIVR RPTVDDSHLP AHLSPLLKQL YARRGALTHE CELVLKGLLR PETMKGLPEA AALIADAMQA NKSILIVGDF DADGATSTSV CMLALRMMGA VKVDYLIPNR FDYGYGLSPE IVAVAASKQA EMLITVDNGI SSIDGVAAAK AFGMQVVITD HHLPGHELPA ADAIVNPNQP DCPFASKSIA GVGVAFYLMT ALRAELRTRN WYQTRGIAEP NLGTLLDIVA LGTVADVVSL DANNRILVEA GLQRVRAGRC RVGITALLEV AKRNPARIVA SDFGFAVGPR LNAAGRLDEM ALGVETLLCE DMMYARRMAA ELDGLNQERR ELEVGMQQEA LKSLEHLKLN EDELPWGIAL FQEDWHQGVI GILASRIKDK YHRPVIAFAD AGNGQIKGSA RSIKGLHMRD LLELVNTRHP GLIIKFGGHA MAAGLSLKAG SFATFAKAYD DAVRELLKPE LLTGELWSDG ELTPTELNLE MAQLLRNAGP WGQAFEEPLF DGYFTIVQQR LVGERHLKLV LETQCGTVML DAIAFNVDLH TWPDATIHHA RIVYKLDVNE YRGNFTLQLM VEQIEAM
|
| |