| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_0827 |
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| Symbol | |
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| ID | 4842411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | + |
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| Start bp | 929341 |
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| End bp | 931335 |
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| Gene Length | 1995 bp |
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| Protein Length | 664 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640118046 |
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| Product | transketolase |
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| Protein accession | YP_001049221 |
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| Protein GI | 126173072 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000324946 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTCCC GTAAAGTACT CGCAAACGCA ATCCGTGCGT TAAGTATGGA TGCAGTTCAA
AAAGCAAATT CAGGCCATCC CGGCGCCCCA ATGGGTATGG CAGATATTGC TGAAGTGCTG
TGGAATGATT TCCTTAAGCA CAACCCGACC AATCCTAAAT GGGTAGATAG AGACCGTTTC
GTCCTTTCTA ACGGTCACGG TTCAATGCTG ATCTACTCTT TACTTCACCT GACAGGTTAT
GAATTACCAA TCGAAGAACT GAAACAGTTC CGTCAATTGC ATTCAAAAAC CCCGGGTCAC
CCAGAATACG GTTACACCCC AGGTGTTGAA ACCACAACGG GTCCACTCGG CGCGGGCATC
AGCAATGCTG TCGGTATGGC GATTGCTGAA AAAACCTTAG CGGCACAGTT TAACCGTGAT
GGTCACGATA TCGTTGATCA CTACACTTAC TGCTTCGTCG GCGACGGTTG TTTGATGGAA
GGTATTTCCC ACGAAGCCTG TTCATTAGCC GGTACTTTAG GTCTAGGCAA ACTGGTCGCA
TTTTGGGATG ACAACGGTAT TTCTATTGAT GGCCATGTTG AAGGCTGGTT CACCGATGAT
ACGCCAAAGC GTTTTGAAGC TTACGGCTGG CATGTGATTG CCGGTGTTGA CGGTCACGAT
AGCGCGGCAA TCCGTGCTGC TATCGAAGCG GCGAAAGCGG TGACCGATAA ACCAACCATG
ATTTGCTGCA AAACCATTAT CGGTTTTGGC TCACCCAACA AATCTGGCAG CCACGATTGC
CACGGCGCGC CATTAGGCGA TGCGGAAATC GCCGCAGCCC GTGAATTCCT TGGCTGGCCA
TACGCCCCAT TTGAAATCCC TGCTGACGTT TATGCCGGTT GGGATGCCAA AGAAGCCGGT
GCTGCCCGTG AAGCGGCATG GAACGAGAAG TTTGCTGCTT ATAGCGCAGC TCACCCAGAA
CTGGCTGCTG AATACGAGCG CCGTGTACTG AAAGGTGAAT TACCTGCTGA TTTTGAAGAA
AAAGCGCAGG CATTCGTGCA AGCATCACAG GACAAAGCCG AAGGTATTGC GAGCCGTAAA
GCCTCACAAA ATGCCATCGG TGCTTTCGGT GCCATGTTAC CTGAACTGTT AGGCGGCTCT
GCTGACTTAG CGGGTTCTAA CTTGACACTG TGGTCAGGTT CTAAAGGTAT TCAAGACGAT
CCAGCTGGTA ACTACATTTA CTACGGCGTG CGTGAATTTG GCATGAGCGG CATTATGAAC
GGTGCTTCGC TGCATGGTGG TTTCATCAAC TACGGCGCAA CTTTCATGAT GTTCATGGAA
TACGCACGTA ACGCAGTCCG CATGTCGGCG CTGATGGGCA TTCAAAACAT CTTCGTTTAT
ACCCATGACT CTATCGGTCA AGGTGAAGAT GGTCCAACGC ATCAGCCAGT TGAGCAACTA
GCTAACCTGC GTATGACGCC AAATATGGCC GTATGGCGCC CATGTGATGC GGCAGAAACG
GCGGTTTCTT GGAAAGCTGC GATTCAACGT CGCAATGCGC CAACGTCACT GATTTTCAGC
CGTCAAAACC TCAAAGCCCA AGCGCGTACC GCTGAGCAAT TAGCCAACGT GGCTAAAGGT
GCTTATGTAC TGCAAGACTG TGCGGGTACA CCAGAACTGA TCCTGATCGC AACCGGTAGC
GAAGTACAAT TGGCGATGGA TTCTGCGGCT GCATTAACTG AGCAAGGTAA ACAAGTTCGC
GTAGTCTCTA TGCCATCGAC AACTGAGTTC GATAAGCAAG ATGCCGCTTA TAAAGAATCG
GTATTACCAC GCGCTGTGAC TAAACGTGTG GCTATCGAAG CGGCGCATAC CGATTTCTGG
TACAAGTACG TCGGTTTTGA AGGCACTGTT GTTGGCATGA CCACTTTTGG TGAGTCAGCG
CCGGGTAACG TGTTATTGAA TCACTTCGGT TTCACCGTTG AAAATGTGCT GAATGCTGCA
AAATCATTGG GCTAA
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| Protein sequence | MSSRKVLANA IRALSMDAVQ KANSGHPGAP MGMADIAEVL WNDFLKHNPT NPKWVDRDRF
VLSNGHGSML IYSLLHLTGY ELPIEELKQF RQLHSKTPGH PEYGYTPGVE TTTGPLGAGI
SNAVGMAIAE KTLAAQFNRD GHDIVDHYTY CFVGDGCLME GISHEACSLA GTLGLGKLVA
FWDDNGISID GHVEGWFTDD TPKRFEAYGW HVIAGVDGHD SAAIRAAIEA AKAVTDKPTM
ICCKTIIGFG SPNKSGSHDC HGAPLGDAEI AAAREFLGWP YAPFEIPADV YAGWDAKEAG
AAREAAWNEK FAAYSAAHPE LAAEYERRVL KGELPADFEE KAQAFVQASQ DKAEGIASRK
ASQNAIGAFG AMLPELLGGS ADLAGSNLTL WSGSKGIQDD PAGNYIYYGV REFGMSGIMN
GASLHGGFIN YGATFMMFME YARNAVRMSA LMGIQNIFVY THDSIGQGED GPTHQPVEQL
ANLRMTPNMA VWRPCDAAET AVSWKAAIQR RNAPTSLIFS RQNLKAQART AEQLANVAKG
AYVLQDCAGT PELILIATGS EVQLAMDSAA ALTEQGKQVR VVSMPSTTEF DKQDAAYKES
VLPRAVTKRV AIEAAHTDFW YKYVGFEGTV VGMTTFGESA PGNVLLNHFG FTVENVLNAA
KSLG
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