| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_0801 |
|---|
| Symbol | |
|---|
| ID | 4841602 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | + |
|---|
| Start bp | 906628 |
|---|
| End bp | 907683 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640118020 |
|---|
| Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
|---|
| Protein accession | YP_001049195 |
|---|
| Protein GI | 126173046 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
|---|
| TIGRFAM ID | [TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000000498693 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATTACC AAAATGATGA CGTTCGCATT AAAGAAGTAA AAGAGTTACT TCCTCCTATC
GCGATTCTAG AACGATTTCC TGCTTCTGAA AAAGCCTCTG CGACTGTGTT TAATGCGCGA
AATAGTATCC ACAATATTCT GGCTAAAACT GATGATCGCC TGTTAGTGGT GATTGGGCCT
TGTTCTATCC ACGATCCCAA AGCGGCGTTG GAATATGGTC AACGTCTGGT TGCGCTGCGT
GAGCGTTATA AGGGTCAACT CGAAATCGTG ATGCGAGTGT ATTTTGAAAA GCCCAGAACC
ACAGTGGGTT GGAAGGGGCT GATTAACGAT CCTTACATGG ATAACAGCTT TAAACTCAAC
GATGGTTTAC GCACTGCGCG TAAGTTATTG GTGGATTTGA ACGATAGCGG CATGCCAACC
GCGGGTGAGT TTCTTGATAT GATCACTCCA CAATATATGG CAGATTTAAT GTGCTGGGGA
GCCATCGGCG CCCGTACTAC TGAATCACAA GTGCACAGAG AGTTAGCCTC AGGTCTTTCT
TGTCCAGTCG GCTTTAAAAA TGGAACTGAT GGCACCATCA AAGTTGCCAT CGATGCGATA
GGTGCTGCCA ATGCACCGCA TCATTTTTTA TCTGTGACTA AATTAGGTCA TTCGGCGATC
GTTTCGACGA AAGGGAATCC TGATTGCCAC ATTATTTTAC GTGGTGGTCG CGAGCCTAAT
TACAGTGCGC CGCATGTCGC TGAAATTAGC CAACAGTTAT TAAAAGCTAA ACTTGCCGAC
AACATCATGA TCGACTTTAG CCACGCCAAT AGCAGTAAAG AGTATCAACG TCAGTTAGTG
GTTGCCGAAG ATGTGGCTGG CCAAGTAGCG ACGGGCAATA CTGCTATTTT TGGTGTTATG
GTAGAAAGCC ATTTAGTGGA AGGTCGTCAG GATTTAATTG AAGGTCAAGA GTTGTGTTAT
GGCCAGAGTA TTACCGATGC GTGTATCGGT TGGGATGATA CCGAGCGCCT GTTGGCCATT
CTGAATCAGA GTATTATCGA ACGCCGTCAG GTTTAA
|
|---|
| Protein sequence | MYYQNDDVRI KEVKELLPPI AILERFPASE KASATVFNAR NSIHNILAKT DDRLLVVIGP
CSIHDPKAAL EYGQRLVALR ERYKGQLEIV MRVYFEKPRT TVGWKGLIND PYMDNSFKLN
DGLRTARKLL VDLNDSGMPT AGEFLDMITP QYMADLMCWG AIGARTTESQ VHRELASGLS
CPVGFKNGTD GTIKVAIDAI GAANAPHHFL SVTKLGHSAI VSTKGNPDCH IILRGGREPN
YSAPHVAEIS QQLLKAKLAD NIMIDFSHAN SSKEYQRQLV VAEDVAGQVA TGNTAIFGVM
VESHLVEGRQ DLIEGQELCY GQSITDACIG WDDTERLLAI LNQSIIERRQ V
|
|---|
| |