| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_0719 |
|---|
| Symbol | |
|---|
| ID | 4842425 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | + |
|---|
| Start bp | 812211 |
|---|
| End bp | 813602 |
|---|
| Gene Length | 1392 bp |
|---|
| Protein Length | 463 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640117941 |
|---|
| Product | UDP-N-acetylmuramate |
|---|
| Protein accession | YP_001049116 |
|---|
| Protein GI | 126172967 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
|---|
| TIGRFAM ID | [TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.161321 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACGTAC ATATTTTAGG AATTTGTGGA ACCTTCATGG GTGGTCTAGC GTTATTGGCT
AGGGCAAAAG GGCACAGAGT GACGGGCTCG GATGCCAATG TCTATCCTCC AATGAGCACG
CAACTAGAGG ACCAAGGCAT TGAGCTTATT CAAGGTTTTG ATCCCAGCCA GCTGGGTGAA
GCAGGGCATT ATCCTGACTT AGTTGTCATT GGTAATGCCA TGAGCCGTGG TAATCCTTGC
GTGGAAGCCG TGTTGAACAT TGGCATCCCT TATACCTCTG GCCCGCAGTT TTTAGCCGAT
CATATTTTGC CTGAGCGTTG GGTACTGGCA GTGTCTGGTA CTCACGGTAA AACCTCGACT
TCTAGTATGT TAGCTTGGAT TTTAGATGAT TGCGGTTATG AGCCTGGGTT CTTAATCGGT
GGCGTACCGC AAAACTTTGG TGTGTCGGCG CGTTTAGGCA AGACGGCTTT TTTTGTGGTT
GAGGCCGATG AATACGACAG TGCCTTCTTC GATAAACGTT CGAAATTCGT GCATTATCAT
CCACGTACCT TAGTGATCAA CAATCTTGAG TTCGATCATG CCGATATTTT TGCCGATCTG
GCCGCGATTC AAAAACAGTT TAATCATTTA GTTCGCACTG TACCTGGCGA AGGAAAGATC
GTTTGGCCCG CCGATTCCCA TGCTGTTAAG CAGACGATTG ATATGGGGTG CTGGAGCGAG
CAAGAAACCT ATCATTTAGC CGAATCTGCC AACGGTTGGT ATGGCAAAGC CTTAAGTGAT
GATTGCCATC GCTTTGAAGT GTTTTTTGAT GGCGAGTCCC AAGGTATTCT CGAATGGGAT
TTGATTGGTC AGCACAATAT TGAAAATGCC ATGATGGCCA TTGCTGCCGC GCGTCATGTG
GGCGTTAAGC CGAGCGCTGC AATTGAAGCC TTAGCTAAGT TTATGCCACC TAAACGTCGA
CTCGAATTAC TCGGAACCGT TAACGGCGTG AGTGTATACG ACGACTTTGC CCATCATCCA
ACGGCGATTG CGACCACGTT AAAAGGCATG CGGGCTAAGG TTGGTCAGAG CAAGATTACT
GTGGTACTCG AGCCGCGCTC AAATACCATG AAGAGCGGTG TCCATAAAGA CACTTTAGCT
TTTTCTATGA TGCAAGCCGA CGAAGCCTTT TTATATCAAG CCGATACCAT TGACTGGAAT
ATGAAAGAAG CCATGGAAGC GGCGGTGATC CCTGTGACTG TGTTACACCA AATTGATGAT
GTGGTCGCCA AAGTAACGGC AACGGCCAAA GCGGGCGACA CCATAGTGGT TATGAGTAAT
GGCGGTTTTG GCGGGTTACA TAAGAAGCTG CTGGCCGCAT TAGAGCTGCG TTCAACTGTA
GAGTTGGTTT AA
|
|---|
| Protein sequence | MHVHILGICG TFMGGLALLA RAKGHRVTGS DANVYPPMST QLEDQGIELI QGFDPSQLGE
AGHYPDLVVI GNAMSRGNPC VEAVLNIGIP YTSGPQFLAD HILPERWVLA VSGTHGKTST
SSMLAWILDD CGYEPGFLIG GVPQNFGVSA RLGKTAFFVV EADEYDSAFF DKRSKFVHYH
PRTLVINNLE FDHADIFADL AAIQKQFNHL VRTVPGEGKI VWPADSHAVK QTIDMGCWSE
QETYHLAESA NGWYGKALSD DCHRFEVFFD GESQGILEWD LIGQHNIENA MMAIAAARHV
GVKPSAAIEA LAKFMPPKRR LELLGTVNGV SVYDDFAHHP TAIATTLKGM RAKVGQSKIT
VVLEPRSNTM KSGVHKDTLA FSMMQADEAF LYQADTIDWN MKEAMEAAVI PVTVLHQIDD
VVAKVTATAK AGDTIVVMSN GGFGGLHKKL LAALELRSTV ELV
|
|---|
| |