Gene Sbal_0690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal_0690 
Symbol 
ID4842752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS155 
KingdomBacteria 
Replicon accessionNC_009052 
Strand
Start bp783519 
End bp784052 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content46% 
IMG OID640117912 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001049087 
Protein GI126172938 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGGCAG GGATACTCCC ACTCAATAGC GCAATGTCTG ATTTTGAGCT GGTTACCTTA 
GCCAGCCAAG GCAACAGAGC CGCCTTTAAA CTGCTGTATC AAAGCCATCA CCAACGTATT
TATACCCTAT CACTGCGCCT TTGCGGCCAT AAAAATATGG CGGAAGAAAT TACCCAAGAG
TGTTTTATTT TAGTGTGGCA GAAGTTGCCG CAATTTCGAG GTGAGAGTCA GTTTTCGACT
TGGTTACACA GCATTTGTGT CAATCAAGCC TTGAGCAGTA TTCGTAAACA ACAATCATTC
TGGGCACGAT TTATCCCACT GGAAAATGAG ACTGAACCTA TGAGTTCAGA TGAAAGTTAT
AGCGGATTAG ATAAGTTGAT TTTCAAACTG CCGCAGCGGG CACGCATGGT GTTCGTACTC
TGCGCCATCG AAGGTTATCA ACACGATGAA ATCGCTGACT TGCTTGGCAT TGCCGTCGGC
ACTAGCAAGA CCCAATACCA TAGAGCTAAG CAACTACTAC AGGAGATGCT GTAA
 
Protein sequence
MTAGILPLNS AMSDFELVTL ASQGNRAAFK LLYQSHHQRI YTLSLRLCGH KNMAEEITQE 
CFILVWQKLP QFRGESQFST WLHSICVNQA LSSIRKQQSF WARFIPLENE TEPMSSDESY
SGLDKLIFKL PQRARMVFVL CAIEGYQHDE IADLLGIAVG TSKTQYHRAK QLLQEML