Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_0679 |
Symbol | |
ID | 4843216 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | - |
Start bp | 771489 |
End bp | 772028 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640117901 |
Product | membrane-flanked domain-containing protein |
Protein accession | YP_001049076 |
Protein GI | 126172927 |
COG category | [S] Function unknown |
COG ID | [COG3428] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000277417 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAGACA AGATCATTCA TCAAGCGGAC TTTGAGTCCA ATCTAGGTTT GTATTGGTTG CTTTCAGGGG CCTCCTATTT CAGCCTCAGC ATAGTCGGCA TTCCCTTGTT ATTGCTTTGG TTTCCAATCG GGCTGTGGGG AACTCGCCGC TATATTCGTA ATATAAGTGC CGAGCTCACC AGTAATAAGC TGATTGTGCG CCGAGGAATA TTAACCCGCA CCGAAAACTC TGTGCCTTTG GACAAAATTA CCGATATGGC ATTAATCCAA GGCCCAATTA TGCGCCTATT TGGTCTGCAT AAACTCACGG TAGAAACCGC AGGGCAATCG GGCGCAGGCG CCTTGATAAG CTTAGTCGGC ATAGTTGATG CGCCTCAATT TAGAACCCGC GTATTAGAAC AAAAAGAGCG TCTTACTCAG CGCCCACATC CAGCGAGTCC ATCTGTACAA CCTGATGATG CGTTATTACA AAACGTAGTC GAGATGGCAG CAAGCCTAAA ACGAATTGAA GCCTTGCTCA GCCAAAAATT AAATAGATAA
|
Protein sequence | MEDKIIHQAD FESNLGLYWL LSGASYFSLS IVGIPLLLLW FPIGLWGTRR YIRNISAELT SNKLIVRRGI LTRTENSVPL DKITDMALIQ GPIMRLFGLH KLTVETAGQS GAGALISLVG IVDAPQFRTR VLEQKERLTQ RPHPASPSVQ PDDALLQNVV EMAASLKRIE ALLSQKLNR
|
| |