| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_0643 |
|---|
| Symbol | |
|---|
| ID | 4845354 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | + |
|---|
| Start bp | 728312 |
|---|
| End bp | 730501 |
|---|
| Gene Length | 2190 bp |
|---|
| Protein Length | 729 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640117866 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001049041 |
|---|
| Protein GI | 126172892 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1944] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00702] uncharacterized domain
[TIGR03549] conserved hypothetical protein TIGR03549 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATCA AAGTTAATTT TCTCGACAAT CTTAGACTTG AAGCCAAGTT TGATGATTTT
ACCGTTACCG CCGATCAGCC GATCCGCTAC AAAGGTGATG GTTCTGCCCC TAGTCCGTTT
GATTATTTCT TAGCGTCGTC AGCCCTGTGT GCGGCCTATT TCGTTAAGGT GTATTGCAAA
GCCCGCGATA TTCCAACGGA TAACATCAGA CTGTCGCAGA ACAATATTGT CGATCCTGAA
GATCGCTACA ACCAGATTTT CCAAATTCAG GTTGAATTGC CAGAAGATAT TTCCGATAAA
GATCGCGAAG GTATTTTGCG TTCAATTGAC CGTTGTACCG TTAAAAAAGT GGTGCAAACG
GGACCAGAAT TTAAGATTGA AACCGTTGAA AACCTAGACG CAGACGCCAA TGCCATGCTG
ATGGGCCAGC CTAATGGCGC ATCGAGCACC TTTATTCTGG GTAAAGATCT GCCACTGGAG
CAGACCATTG CCAATATGAC GGGCATGCTC GCCGATCTTG GAATGAAGAT AGAGATCTCA
TCATGGCGTA ACATAGTGCC GAACGTGTGG TCACTGCATA TTCGTGACGC CGCTTCGCCA
ATGTGTTTTA CCAATGGTAA AGGCGCGACC AAAGAAAGCG CGCTGTGTTC AGCGCTCGGC
GAGTTTATTG AGCGTTTGAA TAACAACTTT TTCTATAATG ATCAATTCTT TGGTACTGAA
ATCGCTAATA GCGAATTTGT GCATTATCCC AATGAAAAGT GGTTTGCGTT AGAGGAAGAC
GATGCGTTGC CTGCGGGTAT TCTGGATGAC TATTGTTTAG AGATTTATAA CCCAGACGAC
GAGCTGTGCG GTTCGCACTT GATTGATACT AACTCGGGCA ATATTAAGCG CGGCATTTGT
GCGATCCCTT ACACCCGTAA ATCTGACGGT GAAACGGTTT ACTTCCCATC GAACCTGATT
GAAAACCTAT TTTTAAGTAA CGGCATGAGC GCGGGCAATA ACCTGCAAGA AGCGCATGTG
CAGTGTTTGT CAGAGATTTT TGAGCGTGCC GTTAAACGCC AAATCATTGA GCAAGAAATT
GTTCTACCAG ATGTACCAAT GCAGGTACTT GAAAAATATC CAAGTATTCT CGCGGGCATT
AACGGCTTAG AAGAGCAAGG TTTCCCAGTT GTAGTCAAAG ACGCTTCACT CGGCGGTCAA
TTCCCCGTGA TGTGCGTGAC CCTAATGAAC CCGAAAACTG GCGGCGTGTT TGCCTCATTT
GGCGCGCACC CAAGCTTTGA AGTGGCATTA GAACGTAGCT TAACTGAGCT GTTGCAAGGC
CGCAGTTTCG AAGGCTTAAA CGACGTGCCA AAACCGACCT TTAATAGCAT GGCGGTCAGC
GAGCCAGAAA ACTTTGTTGA GCACTTTATT GATTCAACAG GGGTGATTTC ATGGCGCTTC
TTTAGCAGTA AATTCGATTA TGAATTCTGT GAATGGGATT TCTCTGGTAG CAGCGAAGAA
GAGGCCAGCG GTCTGTTTGG TATCTTAGAA GCGTTAGGTA AAGAGGTGTA TATCGCTGAG
TTTACTGATT TAGGTGCGTC GGCATGCCGT ATTTTAGTAC CTGATTATTC TGAAATTTAT
CCAGTTGATG ACTTGATTTG GGATAATACC AACAAGGCGC TGGCGTACCG TGAAGATATC
CTAAATCTGC ATTCGTTAAG CACTAAACAG CTGGTCAATT TGGTTAATCG TTTAGAAGAA
AGCCAACTCG ATAACTACAC GGATATCCGC ACCTTAATCG GCATTGTATT CGATGAAAAT
ACCGTTTGGG GTCAGCTCAC CATTATCGAG CTTAAGATCC TGATTTATTT GGCACTCGGT
GCACATGAAG ACGCGATTGA GTTGGTCGGT GAGTTCCTGC AGTTTAACGA CAATACCGTT
AAACGCGGCC TGTTCTACCA AGCCATGAAT GCTGTATTGG AAGTGACTTT AGATGACGAG
TTAGAGCTTG ATGATTTTAT CCATAATTTC AACCGCATGT TCGGTAAAGA TGTGATGGAC
AACGTTGTTG GCTCGGTCAA AGGTAAAGTG CGTTTTTATG GCCTGACTAA GACCAGCATG
CAGCTCGAAG GCATTGAGCC GCATTTAAGA TTGATAGAAA GCTATAAAAA GCTGCATCAA
GCCCGTAAAG CTGCGAAAGA CGCGAATTAA
|
|---|
| Protein sequence | MEIKVNFLDN LRLEAKFDDF TVTADQPIRY KGDGSAPSPF DYFLASSALC AAYFVKVYCK
ARDIPTDNIR LSQNNIVDPE DRYNQIFQIQ VELPEDISDK DREGILRSID RCTVKKVVQT
GPEFKIETVE NLDADANAML MGQPNGASST FILGKDLPLE QTIANMTGML ADLGMKIEIS
SWRNIVPNVW SLHIRDAASP MCFTNGKGAT KESALCSALG EFIERLNNNF FYNDQFFGTE
IANSEFVHYP NEKWFALEED DALPAGILDD YCLEIYNPDD ELCGSHLIDT NSGNIKRGIC
AIPYTRKSDG ETVYFPSNLI ENLFLSNGMS AGNNLQEAHV QCLSEIFERA VKRQIIEQEI
VLPDVPMQVL EKYPSILAGI NGLEEQGFPV VVKDASLGGQ FPVMCVTLMN PKTGGVFASF
GAHPSFEVAL ERSLTELLQG RSFEGLNDVP KPTFNSMAVS EPENFVEHFI DSTGVISWRF
FSSKFDYEFC EWDFSGSSEE EASGLFGILE ALGKEVYIAE FTDLGASACR ILVPDYSEIY
PVDDLIWDNT NKALAYREDI LNLHSLSTKQ LVNLVNRLEE SQLDNYTDIR TLIGIVFDEN
TVWGQLTIIE LKILIYLALG AHEDAIELVG EFLQFNDNTV KRGLFYQAMN AVLEVTLDDE
LELDDFIHNF NRMFGKDVMD NVVGSVKGKV RFYGLTKTSM QLEGIEPHLR LIESYKKLHQ
ARKAAKDAN
|
|---|
| |