Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_0603 |
Symbol | |
ID | 4842519 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | + |
Start bp | 687886 |
End bp | 688935 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640117826 |
Product | ABC transporter related |
Protein accession | YP_001049001 |
Protein GI | 126172852 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCAAACA CGCTCAAGCT TATGCAAGTT CATAGCGATT ATCAGGGCCA GCAAGTACTC AAAGGTTTGA GTTTGACCCT CGACCAAGGG GAAATCCTTG CGCTATTAGG TCCCAGCGGT TGCGGCAAGA CCACACTGTT GCGGGCGGTT GTGGGATTGC AGGCGATTAG CCAAGGTGAA ATCCAGATCA ATGGCCGCGT AGTGAGTGGC GATAGCCAGT TTGTGCCTAG CGAACAGCGC GGTATCGGCA TGATTTTCCA AGACTATGCG CTTTTCCCCC ATTTAACAGT GGCGGAGAAT ATCCTCTTTG GCGTGGCTAA ATTGTCGGCC GCCGAGCGTC AGGCGCGGTT GGATGACATG CTAACCTTAG TCAAACTCGA AGGCTTAGCT CAGCGTTATC CCCATGAGTT ATCTGGCGGT CAGCAGCAGC GTGTCTCGAT TGCGCGTGCA CTTGCCTATG AGCCGCAGTT ATTACTGCTC GATGAGCCTT TTTCTAATAT CGATGCCCAA GTGCGCTACG AGATGATGGC GGAAATTCGC AGCATTTTGA AACAGCGTAA TGTTAGCGCG GTGTTTGTCA CCCACAGTAA GGATGAAGCC TTTGTATTTG CTGATACTTT GGCGATTTTT AATCAAGGCA TTATAGTGCA GCATGGTAGC GCTGAAGCCT TATACGCCGC GCCAAATAGC CGTTATGTGG CGGACTTTTT AGGTAGCGGT AATTACTTAC CCGCCGCAGT GCTCGATGGA CACAGAGTTG CCACTCCTAT CGGTCATTTA ACCAGCCTCA CGCCATTAGG GTTGCCGAGC GAGTTCAGCG GTACGGTATT TTTGCGCCCG CAGCAATTGA CGCTCAGCGC CGATGAGCAA GGTGTGGGTA CGATCACAGA GCGGCGTTTC TTAGGCGCCT TTTGTCATTA CTGGGTCAAA ATTGAAGCCG CCTCCCATGC ATATTATGTC GAAGTGCGAA GCCAAATGAT GCAGCTCACT ATCGGTCAAA AAGTCGGGGT CACGACAGAG CCGCACTCGC TGGTACTATT TGAATCTTAG
|
Protein sequence | MANTLKLMQV HSDYQGQQVL KGLSLTLDQG EILALLGPSG CGKTTLLRAV VGLQAISQGE IQINGRVVSG DSQFVPSEQR GIGMIFQDYA LFPHLTVAEN ILFGVAKLSA AERQARLDDM LTLVKLEGLA QRYPHELSGG QQQRVSIARA LAYEPQLLLL DEPFSNIDAQ VRYEMMAEIR SILKQRNVSA VFVTHSKDEA FVFADTLAIF NQGIIVQHGS AEALYAAPNS RYVADFLGSG NYLPAAVLDG HRVATPIGHL TSLTPLGLPS EFSGTVFLRP QQLTLSADEQ GVGTITERRF LGAFCHYWVK IEAASHAYYV EVRSQMMQLT IGQKVGVTTE PHSLVLFES
|
| |