| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_0579 |
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| Symbol | |
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| ID | 4843989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | + |
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| Start bp | 654070 |
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| End bp | 654849 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640117802 |
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| Product | Sel1 domain-containing protein |
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| Protein accession | YP_001048977 |
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| Protein GI | 126172828 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.171088 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAATACA GATTATGGGT TTTAGGTGCA GGTTTAAGCT TAACGATAGG GCTTAGCTCT
GCGGCGCACG CATTTTCTAT CCCGCAGCCT GCTGCCGAAC TCGCGGCCAG TAAGTTTGTG
CATATACAGG TGACGGCAGA GCAAGGTGAC GCCGATGCCC AATTTTTACT GGGATTAATG
TATCTCTCAG GGCGTTTTGT GGCGCAAGAA GTGCCCTCTG GTTTGCACTG GATATCTCTT
GCCGCCGAGC AGCAACATGA GAAAGCCCAG CAAACCTTAG CCGACCTGTC TTTTGAAGGC
CAATTGATCA AGCGTGACTT ATCCGTGGCC GAGCATTGGT ATCGAGCCTT GAGTGAGCAG
GGCAGTCGTT GGGCACAATT CCGTTTAGGC TTTATTTATG CTTCTGGCGG CGATGGCGTG
CAACGTAACT GTGGTAAAGC GGTCGAGCAA TTTTCCCAAG TGGGTGATGA TGTTGCCTTA
GGTAATGTGG CGTGGATTTT AGCGACTTGC CCCGAAGCTG AGTATCGCGA TGGCAATAAA
GCGGTCGAGT TATCCTTAAA GTTACTCAAA GTGAATGAAA ACGACCCGAC AAATTTAGAT
AATCTGGCGG CGGCTTATGC CGAAGTCGGC GATTTTGGTG CGGCAATTTC GACGCAACAA
AAAGCAATTG AAGCGTTAAA GATGAGCGCC GAAATGACCA AGACAGATGA ATTTATGCAG
CGCTTACAAA CCTACGAGCA AAAGCGTGCG TATCGCGAAA CCTTACGTTT ACTCGAATAA
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| Protein sequence | MKYRLWVLGA GLSLTIGLSS AAHAFSIPQP AAELAASKFV HIQVTAEQGD ADAQFLLGLM
YLSGRFVAQE VPSGLHWISL AAEQQHEKAQ QTLADLSFEG QLIKRDLSVA EHWYRALSEQ
GSRWAQFRLG FIYASGGDGV QRNCGKAVEQ FSQVGDDVAL GNVAWILATC PEAEYRDGNK
AVELSLKLLK VNENDPTNLD NLAAAYAEVG DFGAAISTQQ KAIEALKMSA EMTKTDEFMQ
RLQTYEQKRA YRETLRLLE
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