Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_0578 |
Symbol | |
ID | 4843988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | - |
Start bp | 653004 |
End bp | 653639 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640117801 |
Product | cAMP-regulatory protein |
Protein accession | YP_001048976 |
Protein GI | 126172827 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.001638 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTCTGA TTGGTAAGCC AAAACCTGAT CCAACTTTGG AATGGTTTTT ATCACACTGT CACATTCATA AGTACCCTGC AAAGAGCACT CTTATTCATG CTGGTGAAGA TTCAGATACT CTTTATTACA TAGTAAAAGG TTCTGTAGCG GTATTGATTA AAGATGAAGA AGGTAAGGAG ATGATCCTTT CTTATCTGAA TCAAGGTGAC TTTATCGGTG AACTAGGTTT GTTTGAAGAA CAAGCCGAAC GTACTGCATG GGTTCGCGCT AAGCAAGCTT GTGAAATCGC TGAGATTTCA TACAAGAAAT TCAGACAGTT AATTCAAGTT AACCCTGAAA TTCTGATGAA GCTGTCTGCG CAAATGGCCT ATCGCCTACA AAGCACCAGC CAGAAAGTGG GTAATCTCGC ATTCTTAGAC GTAGCTGGCC GCATTGCCCA AACGCTGTTA CATCTGGCGA AACAGCCTGA TGCTATGACG CATCCTGATG GCATGCAGAT TAAGATCACT CGTCAAGAGA TAGGCCAAAT TGTTGGCTGT TCACGGGAAA CTGTGGGTCG TATCTTGAAG ATGTTAGAAG AACAGAATTT GATCCAAGCT CATGGTAAGA CCATCGTGGT ATACGGTACC CGTTAA
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Protein sequence | MALIGKPKPD PTLEWFLSHC HIHKYPAKST LIHAGEDSDT LYYIVKGSVA VLIKDEEGKE MILSYLNQGD FIGELGLFEE QAERTAWVRA KQACEIAEIS YKKFRQLIQV NPEILMKLSA QMAYRLQSTS QKVGNLAFLD VAGRIAQTLL HLAKQPDAMT HPDGMQIKIT RQEIGQIVGC SRETVGRILK MLEEQNLIQA HGKTIVVYGT R
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