Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_0561 |
Symbol | |
ID | 4844612 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | + |
Start bp | 634631 |
End bp | 635524 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640117784 |
Product | HflC protein |
Protein accession | YP_001048959 |
Protein GI | 126172810 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | [TIGR01932] HflC protein |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000351984 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTAGAT TAAGCGTTAT TCTTATCGCC GTACTCTTAG GTATTGGTTT GTCATCTTTA ATGGTGGTGA ATGAAGGCGA GCGCGCAATT GTGGCGCGTT TCGGGGAAAT TTTAAAAGAC AACGTTGACG GTAATCGAGT CACCCGCGTC TACGGTCCAG GTCTGCACAT TAAAGTGCCT GTGATCGATA AAGTAAAATT ACTCGATGCC CGTATTCAAA CACTCGATGG TGCTGCAGAT CGTTTTGTGA CTTCAGAGAA GAAAGACCTT ATGGTCGATT CCTATGTGAA GTGGCGTATT GCAGATTTCG AAAAATATTA CCTGTCTACA AACGGTGGTA TTAAGTCGAA TGCAGAATCG CTATTACAAC GTAAGATCAA CAACGATTTA CGTACTGAGT TTGGTCGTCG CACTATCAGA GAGATTGTCT CTGGTAAGCG TGATGAATTG CAAAATGACG CGTTAGAAAA CGCCTCAGAA AGCGCCAAAG ACTTAGGTAT TGAAGTTGTC GATGTGCGTG TAAAGCAAAT CAATTTACCT GCTAACGTCA GTAACAGTAT TTACCAACGT ATGCGTGCCG AGCGTCAAGC TGTGGCAAAA GAGCATAGAG CACAAGGTAA AGAGCAATCT GAAATCATTC GTGCAACGAT TGATGCCAAT GTAACAGTGA AGATTGCTGA AGCTGAGCGT AAAGCTTTAA CCATACGTGG TGAAGGTGAT GCATTAGCTG CGAAGATATA TTCTGATGCT TACAGCAAAG ATGCTGAGTT CTTCGGCTTT GTTCGTAGCT TAGAAGCCTA TCGTGCCAGC TTCTCAGGCA AGTCCGATAT CATGGTGTTA GAGCCTGATA GCGAGTTCTT CAAGTATATG AAGAGCACTG CACCTAAGAA GTAA
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Protein sequence | MGRLSVILIA VLLGIGLSSL MVVNEGERAI VARFGEILKD NVDGNRVTRV YGPGLHIKVP VIDKVKLLDA RIQTLDGAAD RFVTSEKKDL MVDSYVKWRI ADFEKYYLST NGGIKSNAES LLQRKINNDL RTEFGRRTIR EIVSGKRDEL QNDALENASE SAKDLGIEVV DVRVKQINLP ANVSNSIYQR MRAERQAVAK EHRAQGKEQS EIIRATIDAN VTVKIAEAER KALTIRGEGD ALAAKIYSDA YSKDAEFFGF VRSLEAYRAS FSGKSDIMVL EPDSEFFKYM KSTAPKK
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