Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_0558 |
Symbol | |
ID | 4844955 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | + |
Start bp | 631848 |
End bp | 632120 |
Gene Length | 273 bp |
Protein Length | 90 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640117781 |
Product | RNA chaperone Hfq |
Protein accession | YP_001048956 |
Protein GI | 126172807 |
COG category | [R] General function prediction only |
COG ID | [COG1923] Uncharacterized host factor I protein |
TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00283933 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTAAGG GGCAATCTTT ACAAGACCCA TTTTTGAACG CATTGCGTCG CGAGCGCGTT CCTGTATCAA TTTACTTGGT GAACGGCATT AAACTCCAAG GACAGGTAGA GTCGTTTGAT CAATTTGTCA TTCTGTTGAA AAACACAGTG AGCCAAATGG TTTATAAACA CGCTATTTCT ACTGTCGTGC CAGCACGCCC ATTCAACGTC ACTGGTCACC AAAATGCCCA AGGCGGATAT GGTGCTCAAG ATGATGCGCC TAGTGGCGAA TAA
|
Protein sequence | MAKGQSLQDP FLNALRRERV PVSIYLVNGI KLQGQVESFD QFVILLKNTV SQMVYKHAIS TVVPARPFNV TGHQNAQGGY GAQDDAPSGE
|
| |