Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_0551 |
Symbol | |
ID | 4843039 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | + |
Start bp | 622965 |
End bp | 623510 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640117770 |
Product | oligoribonuclease |
Protein accession | YP_001048949 |
Protein GI | 126172800 |
COG category | [A] RNA processing and modification |
COG ID | [COG1949] Oligoribonuclease (3'->5' exoribonuclease) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000104193 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGGCAG ATGTAAATAA TCTCATTTGG ATCGATTTGG AAATGACAGG GTTAGAGCCC GACGTCGACA GGATCATTGA AATTGCCACT TTAGTGACAG ATCAAGAACT CAATATTATC GGTCAAGGTC CAGTTATCGC GATTCATCAA TCGGATGACG TGCTGGCCGC TATGGATGAT TGGAATCAAA AGCACCATGG TGAGTCAGGG TTGATTGACC GCGTTCGTGC GAGCCAAGAA ACCGAAGCGC AAGCCGTGGC TAAGACGATT GCCTTCTTAG AACAGTATGT TCCTAAGGGC GCTTCTCCAA TGTGTGGTAA CAGTATTGGC CAAGATAGAC GCTTCTTAAA TCGTTATATG CGCGAGCTGG AAGATTATTT CCACTACCGC AATGTGGATG TCAGTACGAT TAAAGAGCTA GTGAAGCGTT GGAGCCCAGA AACTATGGCG GGCTTTAAGA AGCAAAACAC TCACCAAGCA CTGCAGGATA TCCAAGAGTC GATCGCTGAA TTGCAGTATT ATCGCAGCAA AGTATTTAAA ATTTGA
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Protein sequence | MTADVNNLIW IDLEMTGLEP DVDRIIEIAT LVTDQELNII GQGPVIAIHQ SDDVLAAMDD WNQKHHGESG LIDRVRASQE TEAQAVAKTI AFLEQYVPKG ASPMCGNSIG QDRRFLNRYM RELEDYFHYR NVDVSTIKEL VKRWSPETMA GFKKQNTHQA LQDIQESIAE LQYYRSKVFK I
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