| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_0548 |
|---|
| Symbol | |
|---|
| ID | 4843981 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | - |
|---|
| Start bp | 619959 |
|---|
| End bp | 620840 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640117767 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001048946 |
|---|
| Protein GI | 126172797 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5006] Predicted permease, DMT superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0438907 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGTTCTG CTAAACCTTC GGGATTAATT GAATTACATT TGGCTGTGCT GCTATTTGGC
GGCACAGCTT TGTTTTCTAA ATTAATCCCA CTCAGCGCCC TCGACATCAC CTTCCTACGC
TGTATCGTCG CCGCCACTGT GTTAGGTTTG CTGGTCAAAC TCAGCCGTAA ACGGCTAACG
CTGGCCAGCA AACAAGATTA TCTGGTCGCC ATCGGGCTTG GGGTTATTGT CAGCCTGCAT
TGGGTCACGT ATTTTGCCGC CATGCAGCTC TCGTCGGTCG CCATTGGCAT GATTGCGTTT
TTCACCTATC CGGTGATGAC AGTGATTGCC GAGCCGTTGC TGACAGGCAG AAAAATAAAA
TTACTCGATA TGATCAGCGG TGTGTTAGTG CTGATAGGGG TGATATTACT CATCCCTGAG
GCCAATTTAG GTAACGACAC TACGCTGGGC ATTGCCATCG GCATAGTGTC CGCCATCTTG
TTCACCGCCC GTAACTTATT GCACAAACGC TACTTTTCCC AGTACAGCGG CCCACATGCC
ATGTTTTACC AAACCTTGGT CGCCGTCGTG TTCCTAATGC CGTGGCACCA AACGGAATTG
AACAGCATCT CACTCGAAGT GTGGGGATTA ATTATTTTAC TCGGCGTTGT CTTTACCGCC
GCGCCCCACG CACTATTCAC TTCCGCACTG AGGCAACTCA GCGCCAAAAC GGTTGGGCTA
GTCTCTTGCT TACAGCCCTT CTATGGCGCC ATGTTAGCGC TGATTATTTT GGGTGAAGAG
CTCAATCTCA ATACCGTAAT CGGCGGCACT ATCATAGTCG CGACCGCCAT CTTCGAAACC
CATCAATCGC ACCAGTCACA GCGGCGAAAA AAGAACGCCT GA
|
|---|
| Protein sequence | MSSAKPSGLI ELHLAVLLFG GTALFSKLIP LSALDITFLR CIVAATVLGL LVKLSRKRLT
LASKQDYLVA IGLGVIVSLH WVTYFAAMQL SSVAIGMIAF FTYPVMTVIA EPLLTGRKIK
LLDMISGVLV LIGVILLIPE ANLGNDTTLG IAIGIVSAIL FTARNLLHKR YFSQYSGPHA
MFYQTLVAVV FLMPWHQTEL NSISLEVWGL IILLGVVFTA APHALFTSAL RQLSAKTVGL
VSCLQPFYGA MLALIILGEE LNLNTVIGGT IIVATAIFET HQSHQSQRRK KNA
|
|---|
| |