Gene Sbal_0514 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal_0514 
Symbol 
ID4842816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS155 
KingdomBacteria 
Replicon accessionNC_009052 
Strand
Start bp577182 
End bp578939 
Gene Length1758 bp 
Protein Length585 aa 
Translation table11 
GC content47% 
IMG OID640117733 
Productdiguanylate cyclase/phosphodiesterase 
Protein accessionYP_001048912 
Protein GI126172763 
COG category[T] Signal transduction mechanisms 
COG ID[COG2200] FOG: EAL domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00136052 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAGTT TAGATCTGGC TAAAGAGCTC GATAAGATAA TTTCTAAATC GGCAATTAAT 
CCCTTATTTC AGCCAATTTT CAATATATTA GAACATAAGA TCCACGGTTT TGAAGCCTTG
AGCCGCGGCC CTGAACACAG CCCGTTATAC TCCCCAGTGC CGCTATTTCA GACAGCAGAA
CATGAAGGCA AGTTAAGCGA GTTAGAAACC CTTTGTCGGC GCATTTCACT CGAGCAATTT
AAGCTGCGTC AGTTCCAAGG CAAGCTGTTT ATCAATATTT CACCCAAGGC ATTATTAGAT
CCCGCGCACC CCAAGGGCAT GACCTTACAG CTATTGCAAC AACTCGGCAT AGCGCCATCG
CAGGTGGTGA TTGAGCTGTC AGAGCAATAT CCCGCCGATG ATATCGACTT ACTCAAATCT
TGCTTGAATC ATTATCGTAG CCAAGGTTTT TTAACGGCCA TCGATGACTT AGGTGCGGGT
TATTCAGGCC TAAGACTCTG GTCAGAATTG TCGCCCGACT ATGTCAAAAT CGACCGCCAC
TTTATCCATG AAATTGATTC GACCCCCGTC AAACAAGAGT TTGTCCGCTC AATTGTGGAG
TTATGCCAAA GCTTAACCTG CAAAGTGATA GCAGAAGGGA TTGAAACGCA AGAGGAATTA
GCCGTACTCA AACAACTGGG TATCGTCTAT TGCCAAGGCT ATTTGTTAGG TCGTCCAGAA
GTGCTCCCCT GCCGCGCGAT GAAAGCGACC TTAGTGCCAA ACAATACTCA GATTCAACCT
AGATACAGCG AATCCGCCGA AAGCCTGTGC ACGAATGCCA TCACAGTGGC GCCCACACTC
AAACTCAAAT TTTTAAGCGA CACCTTTAGC TCGCAACCCG CACTGCAGGC GGTGGTTGTG
GTCGATAATC AGTTGCCGCT GGGGATTATC AGCCGCGCGA CCTTACTCGA ACTTTTCAGT
ACGCCCTATG GTCGTGCCTT GCATGAGAAT CATGCCGTAA GTGAAGTGAT GGACCCGCAG
GTCATCCAAA TTGAGGCCAA CGAACCCTTA TCTACTGTGA GCCAATTGCT GACCTCAGAG
ACGGCCAATA CAGTCGCTCA GCAGTTCATC ATACTTCGCC GAGGCAAACT GCTCGGCATA
GGCCACACTA AAGATTTACT GCAAAGGATT ACAGAGCACA GAATTAAGAT GGCCCGCCAT
GCGAATCCTC TGACAGACTT GCCGGGCAAT GTGCCCATTC AGGAGGAATT AAAACGCCTT
AAAATCCAAA AGAAACACTT TTACCTGGCC TATTTTGATT TATGTAACTT TAAGCCCTAT
AACGATATTT ATGGCTTTTG CCGCGGCGAT GAAGTGATTT GTGAAGTGAC TAATCTGTTA
CTGAAATATA AAAGTGACAA TTGCTTTATC GGCCATGTCG GCGGCGATGA CTTTGTGATT
ATCAGCACCT GTGAACATAT GATCAGCCGT TGTCAGCGAA TTCTAGCGGA CTTTGAAACC
CATAAGCATT TGTTTTACAG CGCCGAGCAT TGGCAAGCGC AAGAGATGCT CGCCGACGAT
AGACAAGGCG AAGCCTGCTA CCATCAATTG ATCAGCCTGT GCGTGGGTAT CTTGCCACCA
GCACTGACCT TTAACGCCAA TGAACATAGC CTGTCGACCT TAAGTGCCCG GGCAAAAAAA
CAGGCAAAAT CCGCGAATAA CGGATTTTAT CTGTTAGAAA ATCACCTTAC TATCGAGACT
CAAGCGCTCA GTGCTTGA
 
Protein sequence
MTSLDLAKEL DKIISKSAIN PLFQPIFNIL EHKIHGFEAL SRGPEHSPLY SPVPLFQTAE 
HEGKLSELET LCRRISLEQF KLRQFQGKLF INISPKALLD PAHPKGMTLQ LLQQLGIAPS
QVVIELSEQY PADDIDLLKS CLNHYRSQGF LTAIDDLGAG YSGLRLWSEL SPDYVKIDRH
FIHEIDSTPV KQEFVRSIVE LCQSLTCKVI AEGIETQEEL AVLKQLGIVY CQGYLLGRPE
VLPCRAMKAT LVPNNTQIQP RYSESAESLC TNAITVAPTL KLKFLSDTFS SQPALQAVVV
VDNQLPLGII SRATLLELFS TPYGRALHEN HAVSEVMDPQ VIQIEANEPL STVSQLLTSE
TANTVAQQFI ILRRGKLLGI GHTKDLLQRI TEHRIKMARH ANPLTDLPGN VPIQEELKRL
KIQKKHFYLA YFDLCNFKPY NDIYGFCRGD EVICEVTNLL LKYKSDNCFI GHVGGDDFVI
ISTCEHMISR CQRILADFET HKHLFYSAEH WQAQEMLADD RQGEACYHQL ISLCVGILPP
ALTFNANEHS LSTLSARAKK QAKSANNGFY LLENHLTIET QALSA