| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_0477 |
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| Symbol | |
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| ID | 4843775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | + |
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| Start bp | 538927 |
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| End bp | 540249 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640117697 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001048876 |
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| Protein GI | 126172727 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTCAC ATAATCACTT TAACGCTACT AAGTCTTATC CAGTTGCAAT TTCAGACACT
GCTGCACCTG ACATCATTAC GTCTCAAATC ACAGCACCTG AAATCATTGC GCCTCAAATT
ACAGTACCTG CAAAGCGGCA GTTCACGTTG TCGACACTCG CCCTCGCATT ATGTGTGCTC
GGCTCTGCTG CGCTTTTCAC ATCCCAACCT TCATGGGCAG GGGATGATCA CGGTTCAGCT
ACTCAAACTG AGCAAGCGGA TGAACACGGT GCACAGGCCC TGAAATTGAC CCAAGTGCAG
CAAGCATTGG CGGGCATTAG CTTGTTACCC CTGTCGAGCG ATAGCTTGAA TATCGCCAAT
TTGAATCTGG ATATTAGGGC GACGGCGACC TTAGTGGTCG ATCGCGATAG AACCGCCACC
CTTGCGCCGC AGCTCGATGT GCGTGTGTTG GCGCGCCATG TGGTGCCGGG GCAAGAAGTC
AAAAAAGGTG AGCCTTTACT TACCTTGGGT GGCTCAGCCG TTGCGCAGGC ACAGGCGGAC
TACATCAATG CCGCCGCCGA ATGGAGCCGA GTTAAACGCA TGAGCGAAGG CGCCGTGAGT
GTCAGCCGCC GTATGCAGGC GCAGGTGGAT GCCGAACTTA AACGCGCAAT TTTAGAGGCG
ATTAAGATGA CGCCCGCGCA AATTCGCACT CTGGAATCGA CGCCCGAAGC CATCGGCAGT
TATCAACTTT TAGCGCCGAT TGACGGACGA GTGCAGCAAG ATATCGCCAT GTTAGGCCAA
GTATTTAGTG CGGGCACGCC GTTAATGCAG CTGACCGACG AGTCTTATTT ATGGGTCGAG
GCGCAGCTAA CGCCTACCCA AACTGCGCAT ATCACTGTCG GCAGTGCGGC CTTAGTGCAA
GTGGGGGATA AAACGCTGGC GGGCAAGATC ATAGGCCGCT CCCATGAGCT CGATAGCGTG
ACTCGCACCG AGCAAGTGCT GGTGAGTATG CCCAATCCTG ATCATGTGCT ACATGCGGGG
CAATTTGCCG AACTCTACTT TGCCAATACT GTCGCCAACT CTGCTGATAA GGCTGGTGGA
ATCGTGCTGC CCGATGCGGC GCTCACCCGC AGCGGCGACG GCGACTGGCA GATTTTTATT
CAAGATGAAG ATGGCTTCGA GTCCATTGAG GTAGAAGTGG TGCTGCGTCA ACGCGGTTTG
AATCTAGTGC GTGGGCCAGA GCTTGAAAAA GCCCAGCAGG CACAGCTTAA GGTTGTGGTG
GCTGGCGCAT TTTTCTTGGC GTCCGAGCAG GCGAAAGCAG GCTTTGATAT TCATAACCAT
TAA
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| Protein sequence | MNSHNHFNAT KSYPVAISDT AAPDIITSQI TAPEIIAPQI TVPAKRQFTL STLALALCVL
GSAALFTSQP SWAGDDHGSA TQTEQADEHG AQALKLTQVQ QALAGISLLP LSSDSLNIAN
LNLDIRATAT LVVDRDRTAT LAPQLDVRVL ARHVVPGQEV KKGEPLLTLG GSAVAQAQAD
YINAAAEWSR VKRMSEGAVS VSRRMQAQVD AELKRAILEA IKMTPAQIRT LESTPEAIGS
YQLLAPIDGR VQQDIAMLGQ VFSAGTPLMQ LTDESYLWVE AQLTPTQTAH ITVGSAALVQ
VGDKTLAGKI IGRSHELDSV TRTEQVLVSM PNPDHVLHAG QFAELYFANT VANSADKAGG
IVLPDAALTR SGDGDWQIFI QDEDGFESIE VEVVLRQRGL NLVRGPELEK AQQAQLKVVV
AGAFFLASEQ AKAGFDIHNH
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