| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_0432 |
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| Symbol | |
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| ID | 4844642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | - |
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| Start bp | 490785 |
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| End bp | 492818 |
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| Gene Length | 2034 bp |
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| Protein Length | 677 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640117654 |
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| Product | TRAP transporter, 4TM/12TM fusion protein |
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| Protein accession | YP_001048833 |
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| Protein GI | 126172684 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4666] TRAP-type uncharacterized transport system, fused permease components |
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| TIGRFAM ID | [TIGR02123] TRAP transporter, 4TM/12TM fusion protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGATC CCCAACAAGG TCTCAGCGCT AATACAGGCG ATTGGCCCAA GGCGCTGTTC
TATACCGCCT TAATTTTTTC TATTTTTCAA ATCATCACTG CCGCTTTTCA TCCCGTGTCG
ACGCAAGTTC TGCGCGCCAC CCATATTGGC TTTTTGCTGC TCGTAGTTTT TTTGAGTTAT
CCCGCCAGAG GTAAATCACA ACCTTGGCAA CCGCTCGCTT GGCTACTCGG TTTAGCAGGC
ATGGCAACGG CGGCTTATCA GTGGTATTTC GAAGCCGACT TAATTCAACG TTCTGGCGAG
CTGATCGATG CGGACATGGT GATAGGTATC ACTTTGATCG TATTGGTATT TGAAGCGGCG
CGCCGAGTCA TGGGCTGGGC ACTACCGATT ATCTGCGGCA TCTTTTTGGC CTATGGCTTA
TTGGGTCAAT ACCTACCCGG CGATTTGATG CACCGCGGCT ATGGCTTCGA TCAAATCATC
AACCAATTAG CCTTCGGCAC CGAAGGCTTG TACGGCACAC CAACCTATGT GTCGGCGACG
TATATTTTCC TGTTTATTCT TTTCGGTTCC TTTTTAGAAC AAGCCGGGAT GATCCGTTTA
TTTACCGACT TTGCCATGGG ATTGTTCGGC CACAAGCTTG GCGGCCCAGC TAAAGTCGCT
GTGGTCTCAT CGGCGCTGAT GGGAACGATT ACGGGCTCAG GTGTGGCGAA CGTCGTCACC
ACAGGCCAAT TTACCATTCC ATTGATGAAG CGATTTGGCT ATCGCTCTGC CTTCGCCGGT
GGCGTAGAAG CGACATCGAG TATGGGCAGT CAGATCATGC CGCCTATCAT GGGCGCCGTG
GCCTTTATCA TGGCCGAAAC CATTAACGTG CCTTTTATCG AGATCGCCAA AGCGGCATTG
ATCCCTGCAC TGCTTTATTT TTGCTCAGTA TTCTGGATGG TGCACTTAGA GGCCAAACGC
GCCAATCTTT GTGGCCTGCC AAAAGATCAA TGTCCCGATC CTTGGGCGGC GATTAAAGAA
CGCTGGTATC TCCTTATCCC CTTGTTTATT TTGGTCTACT TGCTGTTTTC GGGCAGAACG
CCGCTGTTCT CTGGCATGGT TGGTTTAGCC CTCACCTCGA TAGTGATCTT AGGCTCGGCC
ATCGTCCTAC GGTTGTCATC AATAGCGATG CGGATTGCCT TTTGGATTGC CCTTGGGGTG
TTGTGTGCTG GCTTCTTCCA ACTCGGGATC GGAGTCGTGT TTGGGGTTAT CGCCCTGCTA
GTCGCCATTT GTTGGTTTAT TAAGGGCGGC AAAGAAACCC TCACCGTTTG CTTACACGCA
TTGGTTGAAG GCGCGCGTCA TGCTGTGCCT GTGGGTATTG CCTGCGCCTT AGTGGGCGTG
ATTATCGGCA TAGTGTCACT CACAGGGATT GCTTCAACCT TCGCAAGCTA CATTCTCGCC
GTTGGCCAAG ACAACCTGTT CTTGTCACTC GTGTTGACTA TGATCACTTG CCTAGTCCTC
GGCATGGGGA TCCCGACGAT TCCTAACTAC ATTATTACCA GCTCAATAGC CGCACCCGCA
TTGCTCGACT TAGGCGTGCC CTTGATTGTG TCGCACATGT TTGTGTTCTA TTTCGGCATC
ATGGCCGATC TCACGCCACC CGTTGCCTTG GCCTGCTTTG CCGCAGCGCC CATTGCGAAG
GAATCCGGGC TTAAGATCAG TCTCTGGGCG ATTCGTATTG CCATTGCAGG TTTTGTGATC
CCCTTTATGG CGGTTTACGA TCCAGCCTTA ATGCTCCAAG GCGATAGCTT ATTAGCGACG
GCCTTTGTGG TACTGAAGGC AACGGTCGGT ATTGGTATTT GGGGCGTGAT CTTTACCGGA
TATCTATTAC AAAAACTCTA CTGGTGGGAA CGCGTTATCG GTTTCCTTGC GGGGGCGAGC
TTGATCCTTG CGACGCCATT GAGTGATGAA ATCGGCTTTG GACTCGCGCT GTTGTTTATC
GTGCAGCACA GTTGGCGCGC GCGCAAACTC AAACGTCTGG CAGAGCAAGG ATAA
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| Protein sequence | MSDPQQGLSA NTGDWPKALF YTALIFSIFQ IITAAFHPVS TQVLRATHIG FLLLVVFLSY
PARGKSQPWQ PLAWLLGLAG MATAAYQWYF EADLIQRSGE LIDADMVIGI TLIVLVFEAA
RRVMGWALPI ICGIFLAYGL LGQYLPGDLM HRGYGFDQII NQLAFGTEGL YGTPTYVSAT
YIFLFILFGS FLEQAGMIRL FTDFAMGLFG HKLGGPAKVA VVSSALMGTI TGSGVANVVT
TGQFTIPLMK RFGYRSAFAG GVEATSSMGS QIMPPIMGAV AFIMAETINV PFIEIAKAAL
IPALLYFCSV FWMVHLEAKR ANLCGLPKDQ CPDPWAAIKE RWYLLIPLFI LVYLLFSGRT
PLFSGMVGLA LTSIVILGSA IVLRLSSIAM RIAFWIALGV LCAGFFQLGI GVVFGVIALL
VAICWFIKGG KETLTVCLHA LVEGARHAVP VGIACALVGV IIGIVSLTGI ASTFASYILA
VGQDNLFLSL VLTMITCLVL GMGIPTIPNY IITSSIAAPA LLDLGVPLIV SHMFVFYFGI
MADLTPPVAL ACFAAAPIAK ESGLKISLWA IRIAIAGFVI PFMAVYDPAL MLQGDSLLAT
AFVVLKATVG IGIWGVIFTG YLLQKLYWWE RVIGFLAGAS LILATPLSDE IGFGLALLFI
VQHSWRARKL KRLAEQG
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