Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_0425 |
Symbol | |
ID | 4842175 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | - |
Start bp | 484909 |
End bp | 486075 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640117647 |
Product | major facilitator transporter |
Protein accession | YP_001048826 |
Protein GI | 126172677 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0738] Fucose permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGAAAAAA TTGCCTTAAC TCAGTCGGCT CAAAAGCCCA GTCTTTTCGT CCCCGTCGCA GGGTTAAGTT TGTTTGCTTT GGCATCTGGC TACTTGATGA GCTTAATCCC ACTGTCACTC ACTTTTTTCG AACTCAGCAA TTCACTTGCC CCATTACTTG CGAGTATTTT TTATTTAGGC TTACTGCTGG GAGCGCCTTG TATTGCTCCT ATTGTTTCCC GTATCGGTCA CAGTAAAGCC TTTATCCTTT TTTTGAATAT CCTGCTTTGC AGCGTTGTCG CTATGATATT AATCCCCAAA AGTGGCGTCT GGTTAGCCTC TCGACTCGTC GCGGGATTTG CGGTTGCAGG GATTTTTGTG GTGGTTGAAT CATGGCTATT AATGGCCGAT ACCCAAAAGC AACGCGCTAA GCGGCTTGGG CTTTACATGA CAGCGCTTTA TGGCGGTACA GCCGTAGGAC AATTAGCCAT AGATTATTTA GGTACAAAGG GCAATCTACC TTACCTAGTG GTCATGGGAT TATTAGCCGC GGCAAGTTTA CCTGCGTTAT TGGTAAAACG CGGTCAACCT CAGGTAAGCG AACAACAGTC AATGTCATTG TCTGCGCTAA AAAACCTAAG TCAGCCTGCC ATTATGGGAT GCTTAGTCTC TGGATTATTG CTCGGCCCTA TCTATGGTTT ACTGCCCATT TATGTGGCAC TGGATATGGG GCTTGATCAG CAAACAGGAC AATTTATGGC TCTCATCATA GTGGGTGGCA TGCTAGTACA ACCTTTAGTC AGTTATTTAT CTCCTATATT TAACAAAAGT GGCTTGATAG TGAGCTTTAG CCTACTGGGC GTCGCGGCAT TATTGCTACT CAGTCAACAT TCAAGTATGA CGCTGATTAT TGGATTTCTA TTGCTTGGCG CCAGCGCTTT TGCCCTTTAC CCGATTGCAA TCAGCCTAGC TTGTGACAAC TTGCCTGCTA GCCAAATGGT TTCAGTGGCG CAAGTGATGC TGCTGAGCTA TTCGGTAGGA TCAGTAATAG GGCCATTAGT TGCCAGCAGC TTTGGCCAAA CGGAGTTCGG CTTACTCATT TATTTAGGCA TATGCTGTAT TCTGAGCAGT ATTTACATTT TTGCTCAATT ACTTATTAAC ACTAAGCCCA GTTTTTCATC GCCTTAA
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Protein sequence | MEKIALTQSA QKPSLFVPVA GLSLFALASG YLMSLIPLSL TFFELSNSLA PLLASIFYLG LLLGAPCIAP IVSRIGHSKA FILFLNILLC SVVAMILIPK SGVWLASRLV AGFAVAGIFV VVESWLLMAD TQKQRAKRLG LYMTALYGGT AVGQLAIDYL GTKGNLPYLV VMGLLAAASL PALLVKRGQP QVSEQQSMSL SALKNLSQPA IMGCLVSGLL LGPIYGLLPI YVALDMGLDQ QTGQFMALII VGGMLVQPLV SYLSPIFNKS GLIVSFSLLG VAALLLLSQH SSMTLIIGFL LLGASAFALY PIAISLACDN LPASQMVSVA QVMLLSYSVG SVIGPLVASS FGQTEFGLLI YLGICCILSS IYIFAQLLIN TKPSFSSP
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