Gene Sbal_0384 details

Gene Information

• Locus tag: Sbal_0384
• ID: 4845041
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS155
• Kingdom: Bacteria
• Replicon accession: NC_009052
• Strand: +
• Start bp: 425592
• End bp: 427415
• Gene Length: 1824 bp
• Protein Length: 607 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 640117599
• Product: ATP-dependent DNA helicase RecQ
• Protein accession: YP_001048785
• Protein GI: 126172636
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0514] Superfamily II DNA helicase
• TIGRFAM ID: [TIGR00614] ATP-dependent DNA helicase, RecQ family; [TIGR01389] ATP-dependent DNA helicase RecQ

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAAAGT TCGTACTCGA CACGCATGAT GATCCGCTCT CGCAACGCCT CGCACAGGTG 
TTTGGTTACC GTGACTTTAG GGACGGTCAG CGGGAGGTGA TAGAACGTGT CTGCGGCGGG 
CAAGATTGCT TAGTGATCAT GCCAACGGGC GGCGGTAAGA GTCTTTGCTA TCAACTCCCC 
GCGTTGCTGA TGGATGGCAT TACGATTGTT GTATCTCCAT TGATTTCTTT GATGAAAGAT 
CAAGTCGATA GCTTGTTGCA AACCGGTGTT GCAGCGGCTT ATCTCAATTC TTCATTGCCG 
CGAGAGCAGA GCGCCGAAGT ATTAAGGCAG CTGCGCCACG GTGAGTTAAA ACTACTTTAT 
GTGTCACCTG AGCGCTTATT AAGCGCTGAT TTTATTGAGC GAATGCAGTC GCTCCAGCTG 
GCGATGTTTG CCATCGATGA GGCGCACTGT ATCAGTCAAT GGGGTCATGA TTTTCGCCCT 
GAATATGCGG CACTCGGCCA GCTAAAACAA CTCTTCCCCT ATGTGCCTAT GATGGCGCTG 
ACGGCAACAG CAGATCAGGC GACTCGGCAG AGTATTTGCG AGCGACTCGG GATTGACCCG 
TTCCGTCTGC TTTCGAGTTT CGACAGGCCT AATATTCGCT ACACAGTGGC GGAAAAGCTC 
AATGCTGCGA ATCAGTTACG GCATTTTCTA ACCCAGCAAA ATGGCACCAA CGGGATTATT 
TACTGTAGTA GTCGTCGCCG TGTCGACGAG GTTGCCGATC GTTTATGTCT GCAAGGCTTT 
AATGCTAAGG CCTATCATGC GGGAATGACG CAGGAAGACC GTGGCGCAGT GCAAGATAGT 
TTCCTTAAAG ATCAAATCGA TATCGTTGTC GCCACTGTGG CTTTCGGTAT GGGGATCAAT 
AAATCGAATG TGCGCTTTGT GGTGCATTAC GATATTCCTA AAAGTATCGA AGCCTATTAT 
CAGGAAACGG GCCGAGCCGG CCGTGATGGG CTTGATGCCG AGGCCTTTAT GTTGTTTGAT 
CCTGCCGATA TTGGCCGGGT GCGACATTTG ATTGAACAGT CTGAGCCAGG GCCACAGCAG 
CAAGTCGAAT TCCATAAACT CAATACCATG GCGGCGTTTG CTGAGGCGCA AACCTGCCGT 
CGCCAAGTGT TGCTGCATTA CTTTGATGAG AGCGCACTAG AGCCCTGTGG TAACTGCGAT 
ATTTGCCTCG ATCCGCCTAA GCGTTATAAC GGCACCGAAG ATGCGCAAAA GGTGTTGTCA 
TGTATTTTCC GTTTAGGCCA GCGTTTTGGT ATTAATCACT TAATTGAAGT GCTGCGCGGC 
TCGAAAGGCG CCCCGATTGT TGACCGAGGC CATGACAAAC TCACGACTTG GGGGATTGGT 
AAAGACAAGA GCCATGAGTA TTGGTTGAGC GTGATCCGTC AATTGATCCA CTTGGGACTG 
GCGAGTCAGG ATGTGACGCG AGGTTCATCT ATAACCTTAA ACCCATCGGC ACGACCTGTA 
CTCAAAGGTG AGGTGGCATT AATGCTCGCC GAACCGCGCA TTCAGTTAAC GACCACAAAA 
CGCAAGGTGA GCCAGTCTAA GGCGCCGCTG AACTACGACC GTAAGCTATT CGCGCGACTT 
AAGTTACTGC GAAGAACCAT AGCTGAGCAG CAGGATGTGC CACCGTATTT AGTGTTTAAC 
GATGCGACGC TGGCGGAAAT GGCGGCCATG ATGCCGACCA GTGCAGGGGA AATGCTCGCC 
GTTAACGGGG TTGGCGAGCG TAAACTGAGT CGTTTCGGCG ACGCTTTTCT CGATGAAATC 
GCGGCTTATT TAGCGGGAGA ATAA 

 

Protein sequence

MEKFVLDTHD DPLSQRLAQV FGYRDFRDGQ REVIERVCGG QDCLVIMPTG GGKSLCYQLP 
ALLMDGITIV VSPLISLMKD QVDSLLQTGV AAAYLNSSLP REQSAEVLRQ LRHGELKLLY 
VSPERLLSAD FIERMQSLQL AMFAIDEAHC ISQWGHDFRP EYAALGQLKQ LFPYVPMMAL 
TATADQATRQ SICERLGIDP FRLLSSFDRP NIRYTVAEKL NAANQLRHFL TQQNGTNGII 
YCSSRRRVDE VADRLCLQGF NAKAYHAGMT QEDRGAVQDS FLKDQIDIVV ATVAFGMGIN 
KSNVRFVVHY DIPKSIEAYY QETGRAGRDG LDAEAFMLFD PADIGRVRHL IEQSEPGPQQ 
QVEFHKLNTM AAFAEAQTCR RQVLLHYFDE SALEPCGNCD ICLDPPKRYN GTEDAQKVLS 
CIFRLGQRFG INHLIEVLRG SKGAPIVDRG HDKLTTWGIG KDKSHEYWLS VIRQLIHLGL 
ASQDVTRGSS ITLNPSARPV LKGEVALMLA EPRIQLTTTK RKVSQSKAPL NYDRKLFARL 
KLLRRTIAEQ QDVPPYLVFN DATLAEMAAM MPTSAGEMLA VNGVGERKLS RFGDAFLDEI 
AAYLAGE