Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_0278 |
Symbol | |
ID | 4842922 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | + |
Start bp | 313607 |
End bp | 314458 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640117494 |
Product | ribokinase-like domain-containing protein |
Protein accession | YP_001048680 |
Protein GI | 126172531 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.365265 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGAATA TTCTGTTAGT TGCCAATCTC AACTGTGATC GGATTTTACT GCTTGATAAA CCTTTAAAAA CAGGTGGGCG TTTCCATTAT CAAGATGGTG GACAAAGGCT CGGTGGTGGC GGGGCAAATA CCGGATTAGG TTTAGTTTGG GCAGGGCATA GCGTCGCATT GGTGAGTCAA GTTGGCCGTG ATGACATGGG AGATTGGCTC ATTGCAGAAG CCAGCACTCA AGGACTCGAT TGCCGTTTAG TGCAGCGCCG AGCCGGTAAC ACTTGCGAAA TGTTACTCGT GATGACGCCA GATGGTGAAC GGACGATTAT TCGGCCACAA AGACCCATAT TTGAGTTATC AGTGCCGCCG AAATGGCAGC CATGGGACGC GCTGTATTTT AATACTTCCG CTGAGGGTTC GGTCAGTTGG GCAAAGACAG CCTTGGAGCA TTGCCTTGTG GTCGCGCAAT TAGCCAAAGA TGACAGGCAG AGACCTTGTC ATATTTTGCT GGCTTCCATG AGTGATATCC AAGGGCGTTG TGATGGCGCC TCTTGGGAAT ATGGCAAAAG CATTGGCGGT GAGGGTCTGC GTTACTTTAT TGTCACCGAT GGCATCAATG GGGCTAAGGT TTACACGCAC GATCAAGTGC AGGATGTTGC GGCTATCCCT GCCACTGTTG TTGATACCAC AGGCGCTGGT GATGCCTATG CGGCGGGACT TATCCATAGT CTATGCACTG GTCAGTCGAT TACCGAGGCG ATGGCTGAAG GCGCTGTTTG GGCGGCATTT GCGGTGGCAA CCGATAGTTC TATTCCGGGT GAGGCACTGA AACAGTATTT AGAGGCGAAG CAAATTGCAT GA
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Protein sequence | MANILLVANL NCDRILLLDK PLKTGGRFHY QDGGQRLGGG GANTGLGLVW AGHSVALVSQ VGRDDMGDWL IAEASTQGLD CRLVQRRAGN TCEMLLVMTP DGERTIIRPQ RPIFELSVPP KWQPWDALYF NTSAEGSVSW AKTALEHCLV VAQLAKDDRQ RPCHILLASM SDIQGRCDGA SWEYGKSIGG EGLRYFIVTD GINGAKVYTH DQVQDVAAIP ATVVDTTGAG DAYAAGLIHS LCTGQSITEA MAEGAVWAAF AVATDSSIPG EALKQYLEAK QIA
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