Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_0258 |
Symbol | |
ID | 4845735 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | - |
Start bp | 293385 |
End bp | 294251 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640117475 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001048661 |
Protein GI | 126172512 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.489347 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTAAAAA TAGAATTACT TGAGAGTTTT ATCGCAGTTG CAGAATGCGG AAACATGTCT AAAGCAGCCG ACAAAGTTTG CCGCACTCAG TCGACCTTAA GCCTACAAAT CAAGAAGCTT GAAGAGGTGG TCGGCCAATC GTTGTTGCTA AGGGATAACA AGGGCACGAC ATTAACTGAG TCGGGATCGA CCCTGTTAAA TTACGCCTAC AAAATGATGC AACTTAACTC GCAAGCAATT CATGATTTAA AAGACTGCCA AAACCGAGAG ATCATTCGAC TCGGAGTGCC AACAGACTAC ATAAAATTTT ATTTAAACAG CTGCTTATTG GAGTTTATCC GAGAATTTAC TTGTATTGAA TTAGTCATTG ATACTGACGT CAGTGGCAAT CTTTTTAAGC GACTACAGCA AGGTGAATTT GACCTGATCG TTGCAACCCA CTGGCAAGCT CCAGTCAACG GTGAATTACT GTTTTCTCGC CGCTTTCATT GGGCTGCGGC AAAGAATGGT CAAGCCCATA AACGTAGTAC TGTGCCAATG GCGCTCTATC CCGAAAACTG CCCAATCCGC GCTCAGGTGT TTGCCAACCA TCAACTGTCA ATGCGTCCAA TCAATGTCTT GCTGTCGACG CCCTCTCCTC AAGCCCTGTG TATGGCCGTT GAAAATGACT TAGCCATCGC ACCTATTGCA GAATTTAGGA CCAATGAGCA TATGCAAATA TTGGATCCGC ACGAACATGG TTTGCCACCT TTACCCATAT TTAATGAATC CCTTTATCTC AATCCTGAAA CGCAGACAGA AGCCACAATG CAATTGATCA CCTTAATCAA AGCCAATGTG GAACACTTGT CTGACACGAT CGACTAG
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Protein sequence | MLKIELLESF IAVAECGNMS KAADKVCRTQ STLSLQIKKL EEVVGQSLLL RDNKGTTLTE SGSTLLNYAY KMMQLNSQAI HDLKDCQNRE IIRLGVPTDY IKFYLNSCLL EFIREFTCIE LVIDTDVSGN LFKRLQQGEF DLIVATHWQA PVNGELLFSR RFHWAAAKNG QAHKRSTVPM ALYPENCPIR AQVFANHQLS MRPINVLLST PSPQALCMAV ENDLAIAPIA EFRTNEHMQI LDPHEHGLPP LPIFNESLYL NPETQTEATM QLITLIKANV EHLSDTID
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