| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_0214 |
|---|
| Symbol | |
|---|
| ID | 4843416 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | + |
|---|
| Start bp | 244164 |
|---|
| End bp | 245105 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640117427 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001048617 |
|---|
| Protein GI | 126172468 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0000152565 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTAAAAC GTTTGGATCT GAATTTACTA CCCGTACTTG AAATCCTGCT TGAGGAACAA
AGTGTAACGG CCGCTGCGGC GCGTTTGCAT TTGAGCCAGT CGGCGGTGAG TAAACAACTG
ACACGCCTGA GGGAAGTGTT TGATGATCCT CTGTTTGAGC GCACCGCCTA CGGCTTAAAG
CCGACGCCTA AGGCTTTGTC ACTCGCGCCT GAATTGCGCC AATGTTTACA GCAATTGGCG
CAATTTACGC GGCCCGACAC CTTCGAGCCC GCCTTAAGTC AGCGGCAGTT TAGAATGCAT
TTGGTTGAAA CCACATACTC GCTGACCTTC CCGCATTTTA TGCCCTCGCT GCTCGCCCAA
GCGCCCGGTG TGAGTCTCAA TTGCCAAACC TGGCGTCTCG ATACCATGGA CAGATTACTG
CGCTGCGACA TCGACTTAGC CATAGGTTGT CGCGAGTGGG ACGAGCGTTC GCCCATGCAT
GTGAGTCATA TTCCCGATGA CTTGTGCCAT GTCGAGTTAG TGCAGGATTA TCCTGTGTGC
TTGATGCGTC GCGATCATCC GGCGTTAACA CAAGAGTGGA ATTTAGACAC CTTCTTGAGT
TATCGCCATC TGCAAGTGGC CTTTGGCGGT TTAGAGCATT GGTTGCTGGA TGATGTGTTG
CAACTTGAGG GGCGCCAGCG TGATATTGCC GTGAACATGA CTGACTTTCA GAGCGCACTC
ACCCTGTGTG AACATAGCGA CTTGATCCTC TGCGCGCCGT CACGTTATGC ATTTGCTGTA
ATGAAATCCT TCGAGCTTCA GTCTTTACCA TCCCCTATCA AGCTGATCCC CGGCGCGTAT
TTATTGATGT GGCATAAACA CTTCGAGCAC GACTTGAGCC ATAAATGGCT GCGAGAACTG
ATCATCAGCC AAGTGCTGCC GTCGATTACG CCTCGGGTTT AG
|
|---|
| Protein sequence | MLKRLDLNLL PVLEILLEEQ SVTAAAARLH LSQSAVSKQL TRLREVFDDP LFERTAYGLK
PTPKALSLAP ELRQCLQQLA QFTRPDTFEP ALSQRQFRMH LVETTYSLTF PHFMPSLLAQ
APGVSLNCQT WRLDTMDRLL RCDIDLAIGC REWDERSPMH VSHIPDDLCH VELVQDYPVC
LMRRDHPALT QEWNLDTFLS YRHLQVAFGG LEHWLLDDVL QLEGRQRDIA VNMTDFQSAL
TLCEHSDLIL CAPSRYAFAV MKSFELQSLP SPIKLIPGAY LLMWHKHFEH DLSHKWLREL
IISQVLPSIT PRV
|
|---|
| |