| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_0199 |
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| Symbol | |
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| ID | 4844572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | - |
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| Start bp | 227527 |
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| End bp | 229647 |
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| Gene Length | 2121 bp |
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| Protein Length | 706 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640117412 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) |
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| Protein accession | YP_001048602 |
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| Protein GI | 126172453 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.996105 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAGAT GGCAACACTT ACTTAAGAAA CTCAGTACGG ATGATCCAGT ACTGCAAGAA
AAGCTGTCGC TCTGGCAAGC ACATCCGCAC AAAACTCCCT TGGCCTTAAT TCAAGGCTTC
AGCTTTATTA GCGCCAACCA AGCGGCCCTC GGTTATTTTG AGGCTGAGTA CGACGCCTTT
GTGAATGCGA CTCCCTATGA TTTTTCGCCG AGAATTCAAT CTTCCGGCCG CAATAGTGTT
GAATATGCGA GGGAAATGAT CCTCGAAGCC ATTGCGGGAA AGAATGTTGA ATTCAACTGG
CTACACCTGA GTCAAGTCGG CAATGAACTG CCAACTCGAG TGTACCTCTA TCGCTGCTAT
CTGCAGCAAC AGCCCGTTGT ACTCGTGGAA TTTCAAGCTC TCAATCGTCG CAATCAATTG
CGCGCAACCA TTTCTGATGG TTTTGCCCAT ATTCCCAAAG AGATTTTGTC GACGACGCTC
GAAGAAAGTG CCGAAGCTGT GTATATCACA GACACGGATG ATCACATTTT GGCCGTTAAT
AAAGCTATGT GCCGTATTTG CGGTTATAGC GCCGAGCAGC TTATTAGTAA AACCCCTGAA
TTTTTAGAGT TGAAAAGCCA TCATTTGGGA GAAGAAACCG AATGCCAAAT TGCACTAAAA
CAAAGGGGCT TTTGGCAGGG TGAGACCTGG AAAAAACGTT CAGATGGTAG TAATTTCCCT
GCTTGGCAAA GTAGTCGAAA AATCATTACC GAAGATGGCG ATCACTATAA TGTGAATATT
TTCAGTGACA TTAGTACGAA AAAGTTGTTA GAAACTCAGC TGACAACCCG TGCTATGTAC
GACACCTTGA CTGGACTGCC TAACCGGTTC CACCTCAAGC AGATCCTCAA CAAAGCACTA
GAGAAGCTCA AAACGGATCC TCTCACATTA GGTGCGCTGA TGTTTTTAGA TCTCAATGGG
TTTAAAAATA TCAATGACAG CTTCGGCCAC TCCATGGGCG ATCGGGTGTT ACAACTCGTC
GCCGCCAGAC TCGAAGCCGG TTGTATCGAA AAAGCCGACA TAGCCCGCAT GGGTGGAGAT
GAGTTTACCT TAGTACTGCA AGACTGCAGC TGCAAAGATG AAATCCAACT GTTTGCCGAA
CAAATTTTAA GTCTATTTGA GAGCCCCTTT GAAATTGAAG GGCAAAAGTT TTTCCTAGGC
ACGAGTATCG GCATTGCGCT ATTTCCAACC CACAGTGATA AAGCAGGACA GCTAATTAGC
CTTGCAGATA CAGCCATGTA TTGTGCTAAA AAGAGCTTAC CGCACCTCGT GTTTTACGAT
AAGGCTATGA GCCAGGCCGC GGAGTTAAAG CTACAGTTGA TCAATAGCCT AAGGCATGCT
CACAGCCTAA AACAATTCAC TCTCGCCTAT CAGGCCATAG TGGATTTACA CACAAATCAA
ACGATAGCTG CCGAAGCCCT ACTGCGCTGG CAAAAATCAC CTACCGAGTA TTATGACGCC
GCCGATTTTG TGCCATTGCT GGAAGAGACA GGGTTAATTG TCAGTATTGG TCAATGGGTA
TTAGAACAGG CTTGCGTGCA AGCGGCACTA TGGCGGGCAC ATAATCAGGC AGACTTTAGA
ATTTCAGTCA ATGTGTCGCC ACTGCAATTG GAACACTTAG ATTTTATCGA CCAAGTGATT
AATGCCTTGG AAATGGCTAA TTTACCTGCT GAGGCACTGA TTTTAGAAAT CACCGAATCG
GCACTGCTAC GCCAACCTGA GCAAGCACGA CTCACACTCA ATCGCATCAA AGCCTTAGGT
GTCAGCATTG CCATTGATGA TTTTGGGACT GGGTTATCTT CACTCAGTCG CTTAGGCACG
TTGCCCATAG ACAGTGTAAA AATTGATGCC GAGTTTGCCC TACGTTTAAA CGAAGTGTCA
GGACAAAAGC TCTGTAATGC CATAGTGCAA CTCGCGCAGG CACTCGATAT TCACTTCGTC
GCCGAAGGCA TAGAGACTCA ACAACAAAGG GACATAATGA CAGACATGGG CCAAGGTTTT
GCCCAAGGAT TTCTTTTTGG CTACCCGAGT TCAGTCGATA ACTTCACCCA AACCTTTCTT
ACGGAAAAAC ATATAGCTTA A
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| Protein sequence | MIRWQHLLKK LSTDDPVLQE KLSLWQAHPH KTPLALIQGF SFISANQAAL GYFEAEYDAF
VNATPYDFSP RIQSSGRNSV EYAREMILEA IAGKNVEFNW LHLSQVGNEL PTRVYLYRCY
LQQQPVVLVE FQALNRRNQL RATISDGFAH IPKEILSTTL EESAEAVYIT DTDDHILAVN
KAMCRICGYS AEQLISKTPE FLELKSHHLG EETECQIALK QRGFWQGETW KKRSDGSNFP
AWQSSRKIIT EDGDHYNVNI FSDISTKKLL ETQLTTRAMY DTLTGLPNRF HLKQILNKAL
EKLKTDPLTL GALMFLDLNG FKNINDSFGH SMGDRVLQLV AARLEAGCIE KADIARMGGD
EFTLVLQDCS CKDEIQLFAE QILSLFESPF EIEGQKFFLG TSIGIALFPT HSDKAGQLIS
LADTAMYCAK KSLPHLVFYD KAMSQAAELK LQLINSLRHA HSLKQFTLAY QAIVDLHTNQ
TIAAEALLRW QKSPTEYYDA ADFVPLLEET GLIVSIGQWV LEQACVQAAL WRAHNQADFR
ISVNVSPLQL EHLDFIDQVI NALEMANLPA EALILEITES ALLRQPEQAR LTLNRIKALG
VSIAIDDFGT GLSSLSRLGT LPIDSVKIDA EFALRLNEVS GQKLCNAIVQ LAQALDIHFV
AEGIETQQQR DIMTDMGQGF AQGFLFGYPS SVDNFTQTFL TEKHIA
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