Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_0174 |
Symbol | |
ID | 4845569 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | + |
Start bp | 199971 |
End bp | 200828 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640117387 |
Product | RNA polymerase factor sigma-32 |
Protein accession | YP_001048577 |
Protein GI | 126172428 |
COG category | [K] Transcription |
COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000841804 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCTTTC AAACGCAATC AATGGCACTG ACAGTCCCAC AGGGCGCCAG TAGTCTAGAA GCTTATATCC ATTCAGTGAC TAGCATCAGC ATGCTGGACG CTGAGGCTGA GTATGAGTTG GCCAAGCGTT TACAGGAAAC TGGTGATCTA CAAGCTGCGA AGCAACTGAT TATGTCGCAC TTACGTTTTG TAGTGCACGT TGCTAAAGGC TATTCAGGCT ATGGTTTGCC ACAGGCAGAC CTGATCCAAG AAGGCAACAT AGGCTTGATG AAAGCGGTTA AACGCTTCGA TCCCGATGTT GGCGTGCGTC TAGTGTCTTT TGCTGTGCAC TGGATCAAAG CTGAAATTCA TGAATATGTG CTGAAAAACT GGCGCATTGT TAAAGTCGCG ACCACTAAAG CGCAACGTAA GTTGTTCTTT AACATCCGTA AAGCGAAAAA ACGCTTAGGT TGGTTCAGCG ATGCAGAAGT CACTATGGTG GCTGAAAATT TAGGTGTATC TAAGGCCGAT GTGACCGAAA TGGAATCACG TATGGCTGCG CAAGATCCGG CATTTGATTT AACCAATGAT CAAGACGAGG AGCATGATTT TGCCCCAGTC CATTATTTGG AAGATCATTC ATCGGATTTA GCGGAAAACA TTGAAAACGA CAACTGGGAA TCGAATGCTC AAGGTCGTTT ATTATCGGCC ATCAAAACCT TAGACGAACG TAGCCAGCAT ATTCTGCGCG CCCGTTGGTT AGATGACGAT AAAACCACAC TGCAAGAACT TGCAGAGACT TATCAAGTGT CGGCTGAACG TATTCGCCAA CTTGAGAAAA ATGCCATGAA CAAGCTGAAA GCTTGCATGG AAGCCTAA
|
Protein sequence | MTFQTQSMAL TVPQGASSLE AYIHSVTSIS MLDAEAEYEL AKRLQETGDL QAAKQLIMSH LRFVVHVAKG YSGYGLPQAD LIQEGNIGLM KAVKRFDPDV GVRLVSFAVH WIKAEIHEYV LKNWRIVKVA TTKAQRKLFF NIRKAKKRLG WFSDAEVTMV AENLGVSKAD VTEMESRMAA QDPAFDLTND QDEEHDFAPV HYLEDHSSDL AENIENDNWE SNAQGRLLSA IKTLDERSQH ILRARWLDDD KTTLQELAET YQVSAERIRQ LEKNAMNKLK ACMEA
|
| |