| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_0171 |
|---|
| Symbol | |
|---|
| ID | 4844687 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | + |
|---|
| Start bp | 196202 |
|---|
| End bp | 198067 |
|---|
| Gene Length | 1866 bp |
|---|
| Protein Length | 621 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640117384 |
|---|
| Product | signal recognition particle-docking protein FtsY |
|---|
| Protein accession | YP_001048574 |
|---|
| Protein GI | 126172425 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0552] Signal recognition particle GTPase
[COG1196] Chromosome segregation ATPases |
|---|
| TIGRFAM ID | [TIGR00064] signal recognition particle-docking protein FtsY |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000116132 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAGA AAGGTTTTTT CTCCTGGTTT CGTAAAGATA AGTCACAAGA TGAGGTCGTC
GCTGAAACTC CAGTTGTTAC TCCAACACAA GACACTGAAG CAGCAGAGCG TTTAGAACAG
GAACGCGCAG AGGCGCAACG TTTAGCTGTT GAGGCAGAGG CTCAAGCGGC CGCAGCAAAG
CTGGCAGCAG AACAGTTAGC TGCCGAGCAG GCGCAAGCCG AGCGTATTGT CCAAGAACAA
GCCGCAATCG AAGCCCAGCG TTTAGCCGAG CAACAAGCCG AAGCGGCGCG TCTGGCGGCT
GCTCAGTTAG AAGCGGAACA ACTTGCGAAA GTGCAAGCCG AGCGTATTGC TCAAGAGCAA
GCGCAAATTG AAGCCCAGCG TTTAGCCGAA CAACAGGCCG AAACGGCACG TCTGGCGGCT
GCTCAGCTAG AGGCTGAACA ACTTGCAGTT GATAAGTTAG CCGCTGAACA AGCAGCTGCA
GAGCAATTAG CCCAAGCGCA AGCTAAGGCT GAAGCCGAGC GTATTGCTCA AGAACAAGCG
CAAATCGAAG CCCAGCGTTT AGCCGAGCAA CAAGCTGAAG CGGCACGACT GGCGGCTGCT
CAGTTAGAAT CTGAACGACT TGCTGCAAAT AACTTAGCCC AAGCGCAAGC CAAGGCTGAA
GCCGAGCGAA TTGACCACGA ACAAGCACAA ATCGAAGCTC AACGTTTAGC CGAGCAACAA
GCCGAAGCGG CACGACTGGC GGCAGCTCAG TTAGAAGCTG AACGTGCTCG TGTTGCCGCC
GAACAAGCCG CTGAAGCGTT AGCTGCGGAG CAACTCGCTG CTGAAGCATT AGCACGTGAG
CAAGCTGAAG CGTTAGCGCA ACAGCAGGCC GAAGCTACGC AAACCGCTGG GCCCGTGACT
GAATTACAGC CAGAGCCGCA GGCTAGACCC GTTAAAGAAG GGCTATTTGC TCGTCTGAAA
CGCGGCTTGA TGCGTACCAG CGAGAATATT GGCAGTGGTT TTATCGGCCT ATTCCGCGGC
AAGAAAATCG ATGATGATCT GTTTGAAGAA CTCGAAGAAC AGTTACTAAT CGCCGACGTT
GGCGTCGAAA CAACCACGCG TTTGATCAAA AATTTGACCG AGCAAGCGTC GCGTAAGCAA
TTGAAAGATG CTGAAGCTTT ATATGACTTG CTACGGGAAG AAATGCAGAA GACGCTCGAC
CCAGTCGCAA TTCCGTTAGT GCCAGACAAT GCAAATGGCC CATTTGTGAT CTTAATGGTC
GGCGTTAATG GTGTGGGTAA AACCACCACT ATCGGCAAAT TAGCCAAACA ATATCAGAGC
CAAGGTAAGT CAGTGATGTT AGCCGCGGGC GATACCTTCC GCGCAGCTGC GGTAGAGCAG
CTACAGGTTT GGGGCCAACG TAATGATATT ACTGTGATTG CCCAACACAC AGGTGCCGAC
AGTGCATCAG TGCTGTTTGA CGCTTTACAA GCCGCCAAGG CACGTAAAGT GGATGTGTTG
ATCGCCGACA CTGCGGGTCG TCTGCAAAAC AAAGCGCACT TGATGGAAGA ATTGAAGAAA
GTGGTGCGAG TGATGAAAAA ACTCGACCCA GATACGCCGC ATGAGGTCAT GCTGACACTA
GATGCGAGCA CGGGACAAAA TGCGATTAGC CAAGCGCAAT TATTCCAAGA AGCCGTAGGT
GTAACGGGTA TTACCATCAG CAAGTTAGAC GGAACGGCTA AGGGCGGCGT GGTGTTTGCG
ATTGCCGACA AGTTTAATAT TCCGATCCGT TACATAGGCG TGGGTGAGCA AATTGATGAT
TTGCGTACCT TCAATTCGAA AGAATTTATC GATGCCTTGT TCACTCAAGA AAAAGCGGAT
AGCTAA
|
|---|
| Protein sequence | MAKKGFFSWF RKDKSQDEVV AETPVVTPTQ DTEAAERLEQ ERAEAQRLAV EAEAQAAAAK
LAAEQLAAEQ AQAERIVQEQ AAIEAQRLAE QQAEAARLAA AQLEAEQLAK VQAERIAQEQ
AQIEAQRLAE QQAETARLAA AQLEAEQLAV DKLAAEQAAA EQLAQAQAKA EAERIAQEQA
QIEAQRLAEQ QAEAARLAAA QLESERLAAN NLAQAQAKAE AERIDHEQAQ IEAQRLAEQQ
AEAARLAAAQ LEAERARVAA EQAAEALAAE QLAAEALARE QAEALAQQQA EATQTAGPVT
ELQPEPQARP VKEGLFARLK RGLMRTSENI GSGFIGLFRG KKIDDDLFEE LEEQLLIADV
GVETTTRLIK NLTEQASRKQ LKDAEALYDL LREEMQKTLD PVAIPLVPDN ANGPFVILMV
GVNGVGKTTT IGKLAKQYQS QGKSVMLAAG DTFRAAAVEQ LQVWGQRNDI TVIAQHTGAD
SASVLFDALQ AAKARKVDVL IADTAGRLQN KAHLMEELKK VVRVMKKLDP DTPHEVMLTL
DASTGQNAIS QAQLFQEAVG VTGITISKLD GTAKGGVVFA IADKFNIPIR YIGVGEQIDD
LRTFNSKEFI DALFTQEKAD S
|
|---|
| |