Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_0142 |
Symbol | |
ID | 4845606 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | + |
Start bp | 163127 |
End bp | 163705 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640117355 |
Product | putative DNA uptake protein |
Protein accession | YP_001048545 |
Protein GI | 126172396 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [S] Function unknown |
COG ID | [COG0316] Uncharacterized conserved protein [COG0694] Thioredoxin-like proteins and domains |
TIGRFAM ID | [TIGR00049] Iron-sulfur cluster assembly accessory protein [TIGR03341] IscR-regulated protein YhgI |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.862919 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTACCA TTTCCGATGC GGCTCAAGCC CATTTTGTTA AGTTGTTAGC AGATCAACCT GAAGGCACTC ATATTCGCGT ATTTGTGATC AGTCCAGGAA CCTCGCAAGC CGAGTGTGGT GTGTCTTATT GTCCACCGGA TGCAGTAGAA AGTGATGATA TTGAAATCGA GTTCACTGGC TTCAATGCTA TGGTCGATGA GAAGAGTGCA CCTTTCCTTG AAGATGCCAC TATCGATTTT GTGACTGACC AATTAGGTTC ACAACTCACG CTCAAAGCAC CTAACGCAAA AATGCGTAAA GTGTCTGGCG ATGCACCTTT AGTCGAGCGT ATCGAATACG TGATCCAATC TGAGATCAAC CCTCAGTTAG CTGGCCATGG TGGTAATATC ATGCTGGTTG AAATCACTAA AGAAGGCGTA GCTGTACTGC AGTTCGGCGG TGGTTGTAAC GGTTGTTCTC AAGTTGATAT CACCCTGAAG GATGGTATCG AGAAACAACT GTTAGACATG TTCCCAGGTG AGTTGACTGG CGTACGTGAC GTGACAGATC ACCAACACGG TGAACATTCT TACGCTTAA
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Protein sequence | MITISDAAQA HFVKLLADQP EGTHIRVFVI SPGTSQAECG VSYCPPDAVE SDDIEIEFTG FNAMVDEKSA PFLEDATIDF VTDQLGSQLT LKAPNAKMRK VSGDAPLVER IEYVIQSEIN PQLAGHGGNI MLVEITKEGV AVLQFGGGCN GCSQVDITLK DGIEKQLLDM FPGELTGVRD VTDHQHGEHS YA
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