Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_0119 |
Symbol | |
ID | 4845877 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | - |
Start bp | 137817 |
End bp | 138680 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640117333 |
Product | secretion protein HlyD family protein |
Protein accession | YP_001048523 |
Protein GI | 126172374 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.940377 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAAAAA TCTTTCGTAT CAGCCTCACC CTCATTGTGG TCGCGGTTGC AGGTATAGCC GGACATTGGA TATGGTCACA CTACCTTTAT TCTCCTTGGA CTCGCGACGG CCGAGTTCGC GCCGAAATCA TTACCATAGC GCCAGATGTG TCCGGTTGGG TGAACCAACT GAATGTAAAA GACAATCAAG TCGTCAATAA GGGTGATGTG TTGTTCACTG TGGACGATAC CCGCTACAAG GCCACCATTG CCGAATTGAA TGCCAAAGCG GAAAGTCAAA AATTGGCATG GGAACTGGCA AAACATAAGT ACAAACGTCG TATCGGTTTG ACCAATGACA ACTTAGTTAG CAAAGAAACC TTCGACGAAG CCTTTATCAA TACCGAACTG GCAAGAACCA GTTATGAACT CGCACAGGCG CAATTGAATA CCGCCCAAAT TGACTTAGCG CGAACGCAAA TTCACGCTCC CGAAAATGGC ACGCTGATCA ATTTAAGCCT GCGCAATGGC AACTATGTCA GCAAAGGCAA CTCGGTATTT TCGCTGGTCA AACAAGATTC TTTCTATATC ACAGGCTATT TTGAAGAAAC CAAAATCCCC TTGGTTCACA TAGGTCAAAA CGCCGATGTT AGCCTGATGA GTGGCGGCCA TGTCTTACAT GGCAAAGTGA CCAGCATAGG CAAGGCAATC GCCAATACCA ATGTCACTAC TAATGGACAG TTATTGCCGC AAATCGGCCA AACCTTTAAT TGGGTGAGGT TGTCGCAACG TATTCCGGTC GATATTCAGC TAGATAGCAT TCCTAAGGAC ATAGAGCTGA GCGTCGGCAT GACAGTTTCC ATCCAGCTAC AGACTGACAA ATAG
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Protein sequence | MGKIFRISLT LIVVAVAGIA GHWIWSHYLY SPWTRDGRVR AEIITIAPDV SGWVNQLNVK DNQVVNKGDV LFTVDDTRYK ATIAELNAKA ESQKLAWELA KHKYKRRIGL TNDNLVSKET FDEAFINTEL ARTSYELAQA QLNTAQIDLA RTQIHAPENG TLINLSLRNG NYVSKGNSVF SLVKQDSFYI TGYFEETKIP LVHIGQNADV SLMSGGHVLH GKVTSIGKAI ANTNVTTNGQ LLPQIGQTFN WVRLSQRIPV DIQLDSIPKD IELSVGMTVS IQLQTDK
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