| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_0117 |
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| Symbol | |
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| ID | 4845126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | - |
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| Start bp | 133899 |
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| End bp | 135395 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640117331 |
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| Product | sodium/proline symporter |
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| Protein accession | YP_001048521 |
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| Protein GI | 126172372 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR02121] sodium/proline symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTACC TCGCTTACAT TTCCTTAGCT ATCTACTTTA TCGTTATGCT CGCCATTGGC
TTATTCGCTT ACAAAAAATC CACCAGCGAT GTGTCAGGCT ATATTCTTGG CGGCCGTAAG
GTAAGTCCAC AGGTCACCGC ACTCTCAGCG GGTGCATCTG ACATGAGTGG CTGGATGCTA
ATGGGTCTTC CCGGTGCTAT GTTTTTGGTT GGTTTCGAAA CCATTTACAT CGCACTTGGG
CTATTGATTG GTGCTCTAAT CAATTACTTG GTCGTTGCAC CAAAACTTAG GGTTTATACC
GAGGTAGCGG ACAACGCCCT CACTATCCCG GAGTTTTTTG CTAAACGCTT CGGCAATGCT
AACGGCAGTA TCCGTATTAT CTCGGCCGTG ATCATTGTGA TCTTCTTTAC CTTGTATACC
TCAGCGGGTT TAGTGGCTGG CGGTAAATTG TTTGAGTCAG CATTTGGCCT GAACTACGAC
ATAGGTTTAG TCGTCACACT AGCGGTTGTG GTTTCTTATA CCCTGTTAGG CGGATTCTTG
GCAGTGAGCC TCACTGACTT TGTCCAAGGC TGTATTATGT TTGTCGCCTT AGTCTTAGTT
CCTGTCGTGG CATATCAAGA ATTTACCAGC GCTGACACTA TGTTGAACTT TGCGTATCAG
TCAATTCCAC ACTTCACCGA TGCGATGCAA AACGTCACTA TGTTAGGGCT TATCTCAAGC
TTATCTTGGG GACTCGGTTA CTTTGGCCAA CCGCATATTA TTGTGCGTTT TATGGCGATT
CGTTCAGTAG CTGACATTAA AACCGCCAGA CACATAGGTA TGGGCTGGAT GACAGTGACC
ATTGTGGGTG CACTGGCAAC AGGTCTTGTC GGTATCGCTT ACGCCAATAA ATTTGGTATG
AAGCTGACCG ATCCTGAAAC CATCTTTATC GTGTTTTCTG AGTTGTTGTT CCATCCGATC
ATTAGTGGCT TCTTACTGGC CGCCATTCTG GCCGCGATCA TGAGCACCAT TTCATCGCAG
CTATTAGTGT CATCAAGCTC GCTAACGGAA GATATCTATC GCGTGATTTC TAAGAAAGAA
TCTACCGAGA AAGACATGGT GAAAATGGGA CGCTTTGGCG TAGCAGGCGT AGCAATTGTC
GCGAGTCTAC TGGCGCTCGA CCGCTCTAGC AGTGTGCTAT CACTGGTGAG TAATGCATGG
GCAGGATTCG GTGCCGCATT TGGTCCGTTA GTTTTGTTTA GCTTGTATAA AGCGAACCTA
ACCCACAAAG CTGCGATTGC CGGCATAGTG TCAGGCGCTG CTACAGTGTT GTTTTGGATT
TATGCCCCGG TATTGGCAGA TGGACAAGCC TTAACCACAG TGGTGTATGA AATGATCCCC
GGCTTTGCCG TGAGCAGTGT GGTGATTTGG ATAGTCTCGT TACTCGATAC TGATCCCTGT
GCCAAAACCA CTAAATTATT CCATAAGGCT GGCCGTGTTT TAGCCGAAGA CAGATGA
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| Protein sequence | MNYLAYISLA IYFIVMLAIG LFAYKKSTSD VSGYILGGRK VSPQVTALSA GASDMSGWML
MGLPGAMFLV GFETIYIALG LLIGALINYL VVAPKLRVYT EVADNALTIP EFFAKRFGNA
NGSIRIISAV IIVIFFTLYT SAGLVAGGKL FESAFGLNYD IGLVVTLAVV VSYTLLGGFL
AVSLTDFVQG CIMFVALVLV PVVAYQEFTS ADTMLNFAYQ SIPHFTDAMQ NVTMLGLISS
LSWGLGYFGQ PHIIVRFMAI RSVADIKTAR HIGMGWMTVT IVGALATGLV GIAYANKFGM
KLTDPETIFI VFSELLFHPI ISGFLLAAIL AAIMSTISSQ LLVSSSSLTE DIYRVISKKE
STEKDMVKMG RFGVAGVAIV ASLLALDRSS SVLSLVSNAW AGFGAAFGPL VLFSLYKANL
THKAAIAGIV SGAATVLFWI YAPVLADGQA LTTVVYEMIP GFAVSSVVIW IVSLLDTDPC
AKTTKLFHKA GRVLAEDR
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