| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_0114 |
|---|
| Symbol | |
|---|
| ID | 4843299 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | - |
|---|
| Start bp | 128902 |
|---|
| End bp | 131088 |
|---|
| Gene Length | 2187 bp |
|---|
| Protein Length | 728 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640117328 |
|---|
| Product | TonB-dependent siderophore receptor |
|---|
| Protein accession | YP_001048518 |
|---|
| Protein GI | 126172369 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
|---|
| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCCCC TATCTGTTTT AACGTCATGG CGCTCGCCAT TGATCCCTGT ACTTCTCAGC
ACACTCACTT TGACGGTTCA AGCCAATACG GACCCTAAGC AGGATGAGAA AGAAGATACA
GAACAGATAG AAAGATTAAA CGTAGTCGGA ACCTACACCC GAGCGGCAAT GAATAGCGCC
ACGGGTTTGT CTATGTCACT CAAAGAAACC CCGCAAAGCG TCACTTTGAT TACCGAAGAG
ATGATCAGTG ACAAAGGTTT GATCACTATG GAGTCAGTGT TAAACCACAC TCCGGGCGTC
ACTATGGTGG GTGATGCCTC TGAAAACAGT AAGATTTTCG TGCGCGGTTA TGCACTCGAC
AGCGGTGTGC AAATTGACGG CTTAATCACA ACCTCTTCAT CCAATGTTTA CAGCGGCTCA
ATTGATCAAG GTTTAGACCC TGTGATTGCC GAACGAGTTG AAGTGTTAAA AGGTGCGGCC
GGGATCTTAA GCGGCTTAGG TGAACCTTCT GCCACGGTTA ACTTTATTCG TAAACGCCCA
ACGGATGATA CCCGCGCCAC GGCAAGTGTC AGTTATGGCT CGTGGAATAC CTATAGATTA
GAGGCCGATG TTTCTGGCTG GCTAACGGAT TCAGGCAATG TGAAAGGTCG ATTCGTCAGT
GCGGTGAAGA AAGGCGATTC GTTTATCGAC CGCTATCAAC GCGATACCAC AGTGCTTTAT
GGCGTGGTTG AAACGAGTCT AAGTACAGAT ACTAGCTTGT CACTGTTTGC GGACTATCAA
AAATCACAAA CCGACGGTGT GTATAACTGG AACTCTAATC CTGCATTTTA TACCGATGGC
ACAGCTGTCG ATTTCGGCCG CAGTTATTCC AGCTCACAGG ACTGGACCCA TTGGGACGTG
ACCCAAAAAA GTCTCATGGC CGAGTTTAAA CATAGATTCG ATAACGACTG GTCACTCGTT
AGTGCCTACC GTATTGCTAA CGCCACCATA GATGCATTGG CCTTTTACCC TGGCGACAAC
ATAGTGAAAT CAACCGGCGA GTTTGTCGGC CCTTGGGGCG ATACCTATGC CGCCCAGCAT
GATAGAGAAT CCGATACCAA CAGCTTCAAC CTGTACGCCA CGGGTAACTT CGACTTACTC
GGCCGTGAGC ATAGTGCGGT GATCGGTTTT AACTATGGTG ACAACGAGTT TGACAACATC
AACACGAACT CCGCACCCCA ACGTCGCTAT AACGTGGCAG ATCAAGGCAA TTATCCCAAG
CCTAATCTGC CTAATTCACC CACCAATGGC CAAAAAAATG AACAAAGCCA ATCGGGTGTT
TACGGCACAG TCCGTATCAA TGTATTGGAT TCACTGAAGT TAATGGTCGG CGGACGCGTG
AGTAACTGGT CCTACGAAAA ACATGATCTC GTTGGCAATA GCACAGATGC GACCATGGAA
AAAACCGGCA TTTTCATCCC CTACTATGGC CTAGTCTACG ATGTGACCGA ACAAATCTCT
GTCTATGCCA GCCGTACTGA AATCTTCAAA CCCGGCACCT ATTTTGGTGA AGATGGCCAA
TTACTCGAAC CCGCAGAAGG CACCAACGTC GAAGGCGGCA TCAAAGTCGC ACTGTTCGAT
GACACCCTCA ACATGTCGGC CGCCGTCTAC GAAACCAATA AAGACAACGA ACCCGAATAT
GCGGGTAAAG GTCAGCTACC TTCTGGGGAT TTTATCTACG AGAGTATCGA TGGCATTACC
ACTAAGGGCT ACGAGCTAGA AATTGCCGGA CGGCTTACCG ATCTTTGGGA TATCAGTGGC
GGTTATACCC ATAACGACGC GGAAGATGAA GATGGCCTAC GCCGCCAAAC CTACCTCCCC
GAAGATATTT TCAAACTGAC CACTAAGTAT AACTTTGAAG ACATCCTCCC CGGTGTTACT
GCTGGCGCAA GCTGGCGCTG GCAGAGCAGC ACCTTCTATC AAGGCACTAT TTGGGGTGTC
GATGGCGCGC CGAATGTGGC TTACCGCCAA GCACAATCCG CCTACTCACT CGTCGACTTA
ATGTTTGGCT ACCAAATAAC ACCGTCGATT TCGATGCAAG TGAACATCAA CAATATTTTC
GACAAAAACT ATAACCGCTC ACTCTGGGGT TACGCAGACT TTGGCGAGCC ACGTAATGCC
ACGCTGTCAT TACGTTGGAC GCTGTAA
|
|---|
| Protein sequence | MPPLSVLTSW RSPLIPVLLS TLTLTVQANT DPKQDEKEDT EQIERLNVVG TYTRAAMNSA
TGLSMSLKET PQSVTLITEE MISDKGLITM ESVLNHTPGV TMVGDASENS KIFVRGYALD
SGVQIDGLIT TSSSNVYSGS IDQGLDPVIA ERVEVLKGAA GILSGLGEPS ATVNFIRKRP
TDDTRATASV SYGSWNTYRL EADVSGWLTD SGNVKGRFVS AVKKGDSFID RYQRDTTVLY
GVVETSLSTD TSLSLFADYQ KSQTDGVYNW NSNPAFYTDG TAVDFGRSYS SSQDWTHWDV
TQKSLMAEFK HRFDNDWSLV SAYRIANATI DALAFYPGDN IVKSTGEFVG PWGDTYAAQH
DRESDTNSFN LYATGNFDLL GREHSAVIGF NYGDNEFDNI NTNSAPQRRY NVADQGNYPK
PNLPNSPTNG QKNEQSQSGV YGTVRINVLD SLKLMVGGRV SNWSYEKHDL VGNSTDATME
KTGIFIPYYG LVYDVTEQIS VYASRTEIFK PGTYFGEDGQ LLEPAEGTNV EGGIKVALFD
DTLNMSAAVY ETNKDNEPEY AGKGQLPSGD FIYESIDGIT TKGYELEIAG RLTDLWDISG
GYTHNDAEDE DGLRRQTYLP EDIFKLTTKY NFEDILPGVT AGASWRWQSS TFYQGTIWGV
DGAPNVAYRQ AQSAYSLVDL MFGYQITPSI SMQVNINNIF DKNYNRSLWG YADFGEPRNA
TLSLRWTL
|
|---|
| |