Gene Sbal_0104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal_0104 
Symbol 
ID4842723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS155 
KingdomBacteria 
Replicon accessionNC_009052 
Strand
Start bp116428 
End bp117378 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content49% 
IMG OID640117318 
Producthypothetical protein 
Protein accessionYP_001048508 
Protein GI126172359 
COG category[S] Function unknown 
COG ID[COG2855] Predicted membrane protein 
TIGRFAM ID[TIGR00698] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTCTT CATCGACATC ACAGCAAGAT AATAAGACTC ATCGCATCGT TTTCATCTGT 
GCGGGCTTGT TATGCCTCGC GCCTTTTATC TCGTCGCCCA TGGCGCTAGT CTTAGGTTTT
ACCTTAGCCA GCCTTGGCTG GGTACCTGTG CAATGGAATA TTGCCGCTCT CACCAAAAAA
CTCCTGTCTT ATTCGATCAT TGGCTTAGGA TTTGGGATTA ACTTAAACGC GGCGATAGAG
GCGAGCACCC ACAACTTCGG CTTGATAGTT GGCTCAATCT TTTTCACCCT CAGCTTAGGA
TTTGTGCTCA CCCGCGCACT GAAATTTGAT CATGTCACGG GCCACTTAAT CGCTTCTGGT
ACCGCTATTT GCGGTGGCAG CGCCATTGCC GCAGTCGCTC CGGCCATCAA TGCGCGTAAC
GATCAAACTG CCACTGCGTT AGCCTGTGTG TTTGTGCTCA ATTCAGTCGC GCTATTTTTA
TTCCCCGCAC TCGGCCATTT GCTCAATATG AGCCAATACG ATTTTGGTGT GTGGAGCGCC
ATCGCCATCC ACGATACTTC ATCGGTTGTC GGCGCGGCTT CTGCCTATGG CGATGAAGCC
TTAAAAACCG CCACCACCAT AAAACTCGCC CGCGCCCTGT GGATTATCCC CATCGCACTG
GTCAGCGCTA TGCTGTTTGG TGGCGATAAG CGCAAACTTA ACCTGCCGTA TTTTATCGGT
TTTTATTGTT TAGCCATTGC TGTGGCGCAT TGGTTACCGC AGTTTAACGC TGTTTATGAC
ACCTTGTTTA TGATGTCGAA ACGGGCATTA GTCCTGTGTT TGTTTTTGAT TGGTGCAGGC
ATTACAGTGC AGAAAATGCG GGCGAGTGGC CCCAAACCTT TGTTGCTTGG GGTCATGCTG
TGGGCAGCGA TTGGTATCAC ATCTTTAGTG TATATTCTTT ATTTTCAATA G
 
Protein sequence
MNSSSTSQQD NKTHRIVFIC AGLLCLAPFI SSPMALVLGF TLASLGWVPV QWNIAALTKK 
LLSYSIIGLG FGINLNAAIE ASTHNFGLIV GSIFFTLSLG FVLTRALKFD HVTGHLIASG
TAICGGSAIA AVAPAINARN DQTATALACV FVLNSVALFL FPALGHLLNM SQYDFGVWSA
IAIHDTSSVV GAASAYGDEA LKTATTIKLA RALWIIPIAL VSAMLFGGDK RKLNLPYFIG
FYCLAIAVAH WLPQFNAVYD TLFMMSKRAL VLCLFLIGAG ITVQKMRASG PKPLLLGVML
WAAIGITSLV YILYFQ