Gene Sbal_0087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal_0087 
Symbol 
ID4843419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS155 
KingdomBacteria 
Replicon accessionNC_009052 
Strand
Start bp99315 
End bp100055 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content44% 
IMG OID640117301 
Producthypothetical protein 
Protein accessionYP_001048491 
Protein GI126172342 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.621841 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACGAT TCTTTGCTAT TTTTTGCTTA CTTTTAGCCG TGTTACCTGT ATCCATTTGC 
GCCGCCCAGC CGATTGTCGT CAATGTAGCG ACTGCATCGT GGGATGATTT TGCCAATCGT
GATGAAACAG GCTATTACTT CGAGTTACTT CAGCGGGTTT TCCCTGAACC AGAATGGCAA
CTCAAGGTGC AGTTTATGCC CTTTGCCCGT AGCCTTTATC TGGTTGAACA TAATCGTACC
GATATCACCC TCAGCGTTTA TAAGGGAGAT ACTAAAAAGG CGCTGTTAAC TGAGAATACG
GTTGAAGTGG ATTCTATCTA TGTAGCGGTG ACCGCCGAGT TAGCGGCGAC TTGGACAGGA
CTTGAGAGTC TATCCCATAA GAGGGTTCAG GCCATGTTGG CCTATCGATA CAATATGTTG
ACTCCCGTGC CCATGTACTA CGAAGAAAGT AGCGATATGC TGACTATGCT CAATAGCTTA
AATGCAGGGC GCATAGATGC AGTGCTGGAT TATAAATCTA ATTTGCTTAT GTATGTGCCT
AAGCTGAAGG CGCCACAAAA TTTTGTGATT ATTCAAGGCG TACTCAAGGC TGAAACCTAT
TTCGCCTTCG CGAATACTGA AAAAGGTCAG ATGCTGAAAC ACCATTTTGA CCTTGCACAT
AAACGTTTAA TTGATTCGGG TGAACAGGAC AGGCTTTACC TTGAAACGCT TGAAAAACGA
AGGGTTGATG GTGAAAAATA G
 
Protein sequence
MRRFFAIFCL LLAVLPVSIC AAQPIVVNVA TASWDDFANR DETGYYFELL QRVFPEPEWQ 
LKVQFMPFAR SLYLVEHNRT DITLSVYKGD TKKALLTENT VEVDSIYVAV TAELAATWTG
LESLSHKRVQ AMLAYRYNML TPVPMYYEES SDMLTMLNSL NAGRIDAVLD YKSNLLMYVP
KLKAPQNFVI IQGVLKAETY FAFANTEKGQ MLKHHFDLAH KRLIDSGEQD RLYLETLEKR
RVDGEK