Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_0084 |
Symbol | |
ID | 4843421 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | + |
Start bp | 95360 |
End bp | 97513 |
Gene Length | 2154 bp |
Protein Length | 717 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640117298 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001048488 |
Protein GI | 126172339 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0273141 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCATTCT TTACTCACTT TTTTGGTGTC AGTTGGCAGC AAATGCAGGC CAAGGTGCGC TATCGCATAT TAATCCTGAC ATTACTGCCT ATTCTGCTGA CACTGGTGAG TTTAGTGTTT ATCACTATTT ACTGGAATAT CAGTTACACA GGTAAGCAGC TGTTTATGAA GGTTAAAGCT GACTTATCTG TTGCCGAAAA TACCTTGCAG CAAGTACAAG TACGGCAAGA AAAACAACTC GAACGTGTGG TAACGTCTTG GACCTTTCAA AATGATTTTA GGCCACTTTT CAGTGGTAAA GAATTAACTG GTGAAGTCAT CCACAGAGCC AGTCTCGACG CATTTCTCCT CGAACAGAAA AAACAACTTA ACCTCGATTA TCTGCGTCTC GTCACTGTCG CCGAAGCGGC CGCTGACCCT GATTTACGGC AGATCCTCCC AAAGATAAAC GGTTTATTAC CTTATTCCGG TTTGATGGTG TTGCCGCCCG AACGTTTATC ACGCATCGAC CCAGAATTAG CGGTCACAGC GAGCATCCCG ATAGTCGCGA CTTTGCGAGC GCAGAGCCCG ACGAAAACCG TTGAAGAACG CGGTTTATTG AGCCGTAGTC TACTGCCCGT GCCTGATATG CAAGGTAAAG TGGCGTGGTA TCTGGATGGC GGCATTCTGT TCAATCGTGA CATTCGGATT GTCGACCACA TTCGTGATCT GGTGTACGAC AAGGGCACTT TGCCCGAGCG CTCCATCGGC ACTGTAACCA TCTTCTTAGA TAACATCCGT ATCTCCACTA ACGTGCCGCT GCACTTTTAT CCGACGGGCA ACGAGACGCA AGGTCGCGCG CTGGGAAGTT TAGTGTCGGA GGAAGTGAAA GAAAAAGTGT TAACCCAAGG CGAGCAATGG GTCGACCGCG CTTTTGTGTT TAATGATTGG TTTATATCCG CTTACGCTCC CTTGGAAGAT ATTCGTGGTC AGCGTGTTGG CATGATCTAT ACGGGGTTTT CTGAGTCACC TTTTATCCAT AATTATTTAT TAAATATCAT AGAGCTGGGC ACGATTCTAA TGTTGGTTCT GTTGGTGTCA GGCTTGCTGG TTTATCGCGG CGCCTATAGC TTGTTGCAGC CGATCGAGCG TATCCATCAT GTTGTTCAAG CGGTGCAGTC GGGGCGCAAT ATTCGTATTG GCGCGTTAGG GTTAGATAGG GATAACGAGT TATCGAACTT GGCCGAGCAG TTCGACAGTA TGCTCGATCT GCTGCAGCGC CGAAATGCCC AGATCCAAGC GGCAGCAGAG CAGCTTGAAA TGAAGGTCGA AGAGCGTACC CGCAGCTTGC AGGACAAAAC CTTAGAACTG CAACGTAACG TGGCGTTACT GAATGAAACA CGTCAACAGC TCGTCACCAA CGAGAAGCTC ACCGCACTCG GTGAATTGAC CGCGGGTATT GCCCATGAAA TCAATAATCC GACCGCCGTT ATCCTCGGCA ACATGGAGTT ACTGCGCTAC GAGCTTGGCG ATAATGCGGA AGTAGTAAAA GAAGAAATTG ATCTCGTTAT TCAACAGGTG GGACGGATCA GCACCATTAT CCGCAGCCTG TTGCAGTACA GTCGTCCGGG TGAATTTAAC GCCCCGTTAG AAATGCATCC GATTACCCCC ATTATTGAAG AAATGTTGGT GTTAGTGCGG CATTCGATTC AGAAACAAGA AGTGGTATTG ATCACTGAGT TAAACGCCAG TTGTCCAGTG CAGGTTAATC GACCGCAGTT GCTGCAAGTC TTGATTAATC TGGTAGTAAA CGCGGCGCAT GCGATGGACG GTAAAGGACG TATCTGGGTG CGAACCTATG ACTGGGTGCA GCAAGATATG CCGATTGGCG TCAAAATCGA AGTGGAAGAT GAAGGTTCTG GAATAGCACC AGAGCAGCTA GGGCGGATTT TCGACCCTTT TTACACCACG CGTAAGGATG GCACTGGTTT AGGGCTTTCG CTCAGTTACG GCATTATTAA GCGGATTGGT GGCACGATAG AAGTGAGCTC AACTTTAGGT AAAGGCACAT TATTTACCAT AGGCTTGTAC CATGAGGCGA AGGAAGATCA GCAAAACAAT CCCTATGAGG GCTTACATAT TGCGGGCAAC GACAGCGACA TGTCTGCCGA TTAG
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Protein sequence | MSFFTHFFGV SWQQMQAKVR YRILILTLLP ILLTLVSLVF ITIYWNISYT GKQLFMKVKA DLSVAENTLQ QVQVRQEKQL ERVVTSWTFQ NDFRPLFSGK ELTGEVIHRA SLDAFLLEQK KQLNLDYLRL VTVAEAAADP DLRQILPKIN GLLPYSGLMV LPPERLSRID PELAVTASIP IVATLRAQSP TKTVEERGLL SRSLLPVPDM QGKVAWYLDG GILFNRDIRI VDHIRDLVYD KGTLPERSIG TVTIFLDNIR ISTNVPLHFY PTGNETQGRA LGSLVSEEVK EKVLTQGEQW VDRAFVFNDW FISAYAPLED IRGQRVGMIY TGFSESPFIH NYLLNIIELG TILMLVLLVS GLLVYRGAYS LLQPIERIHH VVQAVQSGRN IRIGALGLDR DNELSNLAEQ FDSMLDLLQR RNAQIQAAAE QLEMKVEERT RSLQDKTLEL QRNVALLNET RQQLVTNEKL TALGELTAGI AHEINNPTAV ILGNMELLRY ELGDNAEVVK EEIDLVIQQV GRISTIIRSL LQYSRPGEFN APLEMHPITP IIEEMLVLVR HSIQKQEVVL ITELNASCPV QVNRPQLLQV LINLVVNAAH AMDGKGRIWV RTYDWVQQDM PIGVKIEVED EGSGIAPEQL GRIFDPFYTT RKDGTGLGLS LSYGIIKRIG GTIEVSSTLG KGTLFTIGLY HEAKEDQQNN PYEGLHIAGN DSDMSAD
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