Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_0047 |
Symbol | |
ID | 4842399 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | - |
Start bp | 56389 |
End bp | 57729 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640117262 |
Product | coproporphyrinogen III oxidase |
Protein accession | YP_001048452 |
Protein GI | 126172303 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
TIGRFAM ID | [TIGR00538] oxygen-independent coproporphyrinogen III oxidase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.577126 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATCGAAA AGTATAACTA CAGCGGTCCC CGTTATACCT CTTACCCAAC GGCATTGGAG TTCGATGACA CATTCACCGA ACAAAACCTG CTGACGGCCA TTGAAAATAG CAAAAGCGAT AAACTGTCGC TGTATATTCA TATCCCGTTC TGCGCCAAGC TTTGTTATTA CTGCGGCTGT AATAAAGTCA TCACCCGCCA CCAACACAAA GCCGATCAGT ACATTGAATA TTTAAGCCAA GAAATTATCA AACGTGCGCC CCTGTTTAAA CATTACAGCG TAACCCAAAT GCATTGGGGC GGCGGTACAC CTACGTTCTT AAATCCTGAG CAGATTCTTA AACTTACGTC ATTGATTAAA GCTAACTTTA ACTTTGCGGA AGAAGGCGAG TACTCAATTG AAGTCGATCC TCGCGAGATA GAGCTGTCAA TGCTCGACAC GTTGAAAGAA GCGGGCTTCA ACCGGATCTC CATCGGCGTA CAAGATTTCA ATAAAGAAGT GCAAATTGCC GTTAATCGCG AACAAGATGA GCAATTTATC TTCGACTTGA TGGCCAAAGC GAAAGCCATG GGTTTTGTGT CAACCAACAT AGATTTAATC TATGGTTTGC CACACCAAAC GCCAGAAACC TTTGCCGTCA CTATGCAGCG CGTTTTAGAT TTATCGCCTG ACCGTCTGTC GGTATTTAAC TATGCTCACT TACCTGCGCG CTTTGCTGCA CAACGTAAGA TCAAAGATGA GCATTTACCT TCGCCAAAAC AAAAACTCGA AATGCTGCAC CAAACTATCG AGACCTTAAC TGGCGCGGGT TACCAATATA TCGGTATGGA CCACTTTGCT AAACCCGATG ACGAGTTAGC CAAGTTACAG CGTGAAGGCA GACTGCACCG CAACTTCCAA GGTTATACCA CCCAAGAAGA ATGTGATTTG TTAGGTCTTG GCGTGTCGTC CATCAGTCAG ATTGGCGACT GCTATGCACA AAACCAGAAA GATATCCGCC CTTACTATGA AGCCATAGAT AAGGAAGGCC ATGCTTTGTG GAAAGGTTGC AGCCTGAACC GTGACGATGA AATCCGCCGC GTAGTGATTA AACAGCTGAT TTGCCACTTC GAACTAGATA TGGCGAAAAT TGATGAGAAA CTGGGGATTA ACTTCGAAAC CTATTTCGCG GAAGATCTTA AGTTAATGCA GACATTTATC GATGACAAGT TAGTTGAAAT CGTCGACAGA CAGATCACTA TCAGCCCAAC TGGCCGTTTA TTGATCCGCA ATATCTGTAT GTGTTTCGAC CTTTACTATC GTCAAAAAGC GCGTCAGCAA CAGTTCTCGC GCGTGATCTA A
|
Protein sequence | MIEKYNYSGP RYTSYPTALE FDDTFTEQNL LTAIENSKSD KLSLYIHIPF CAKLCYYCGC NKVITRHQHK ADQYIEYLSQ EIIKRAPLFK HYSVTQMHWG GGTPTFLNPE QILKLTSLIK ANFNFAEEGE YSIEVDPREI ELSMLDTLKE AGFNRISIGV QDFNKEVQIA VNREQDEQFI FDLMAKAKAM GFVSTNIDLI YGLPHQTPET FAVTMQRVLD LSPDRLSVFN YAHLPARFAA QRKIKDEHLP SPKQKLEMLH QTIETLTGAG YQYIGMDHFA KPDDELAKLQ REGRLHRNFQ GYTTQEECDL LGLGVSSISQ IGDCYAQNQK DIRPYYEAID KEGHALWKGC SLNRDDEIRR VVIKQLICHF ELDMAKIDEK LGINFETYFA EDLKLMQTFI DDKLVEIVDR QITISPTGRL LIRNICMCFD LYYRQKARQQ QFSRVI
|
| |