Gene Sbal_0047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal_0047 
Symbol 
ID4842399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS155 
KingdomBacteria 
Replicon accessionNC_009052 
Strand
Start bp56389 
End bp57729 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content45% 
IMG OID640117262 
Productcoproporphyrinogen III oxidase 
Protein accessionYP_001048452 
Protein GI126172303 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases 
TIGRFAM ID[TIGR00538] oxygen-independent coproporphyrinogen III oxidase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.577126 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGAAA AGTATAACTA CAGCGGTCCC CGTTATACCT CTTACCCAAC GGCATTGGAG 
TTCGATGACA CATTCACCGA ACAAAACCTG CTGACGGCCA TTGAAAATAG CAAAAGCGAT
AAACTGTCGC TGTATATTCA TATCCCGTTC TGCGCCAAGC TTTGTTATTA CTGCGGCTGT
AATAAAGTCA TCACCCGCCA CCAACACAAA GCCGATCAGT ACATTGAATA TTTAAGCCAA
GAAATTATCA AACGTGCGCC CCTGTTTAAA CATTACAGCG TAACCCAAAT GCATTGGGGC
GGCGGTACAC CTACGTTCTT AAATCCTGAG CAGATTCTTA AACTTACGTC ATTGATTAAA
GCTAACTTTA ACTTTGCGGA AGAAGGCGAG TACTCAATTG AAGTCGATCC TCGCGAGATA
GAGCTGTCAA TGCTCGACAC GTTGAAAGAA GCGGGCTTCA ACCGGATCTC CATCGGCGTA
CAAGATTTCA ATAAAGAAGT GCAAATTGCC GTTAATCGCG AACAAGATGA GCAATTTATC
TTCGACTTGA TGGCCAAAGC GAAAGCCATG GGTTTTGTGT CAACCAACAT AGATTTAATC
TATGGTTTGC CACACCAAAC GCCAGAAACC TTTGCCGTCA CTATGCAGCG CGTTTTAGAT
TTATCGCCTG ACCGTCTGTC GGTATTTAAC TATGCTCACT TACCTGCGCG CTTTGCTGCA
CAACGTAAGA TCAAAGATGA GCATTTACCT TCGCCAAAAC AAAAACTCGA AATGCTGCAC
CAAACTATCG AGACCTTAAC TGGCGCGGGT TACCAATATA TCGGTATGGA CCACTTTGCT
AAACCCGATG ACGAGTTAGC CAAGTTACAG CGTGAAGGCA GACTGCACCG CAACTTCCAA
GGTTATACCA CCCAAGAAGA ATGTGATTTG TTAGGTCTTG GCGTGTCGTC CATCAGTCAG
ATTGGCGACT GCTATGCACA AAACCAGAAA GATATCCGCC CTTACTATGA AGCCATAGAT
AAGGAAGGCC ATGCTTTGTG GAAAGGTTGC AGCCTGAACC GTGACGATGA AATCCGCCGC
GTAGTGATTA AACAGCTGAT TTGCCACTTC GAACTAGATA TGGCGAAAAT TGATGAGAAA
CTGGGGATTA ACTTCGAAAC CTATTTCGCG GAAGATCTTA AGTTAATGCA GACATTTATC
GATGACAAGT TAGTTGAAAT CGTCGACAGA CAGATCACTA TCAGCCCAAC TGGCCGTTTA
TTGATCCGCA ATATCTGTAT GTGTTTCGAC CTTTACTATC GTCAAAAAGC GCGTCAGCAA
CAGTTCTCGC GCGTGATCTA A
 
Protein sequence
MIEKYNYSGP RYTSYPTALE FDDTFTEQNL LTAIENSKSD KLSLYIHIPF CAKLCYYCGC 
NKVITRHQHK ADQYIEYLSQ EIIKRAPLFK HYSVTQMHWG GGTPTFLNPE QILKLTSLIK
ANFNFAEEGE YSIEVDPREI ELSMLDTLKE AGFNRISIGV QDFNKEVQIA VNREQDEQFI
FDLMAKAKAM GFVSTNIDLI YGLPHQTPET FAVTMQRVLD LSPDRLSVFN YAHLPARFAA
QRKIKDEHLP SPKQKLEMLH QTIETLTGAG YQYIGMDHFA KPDDELAKLQ REGRLHRNFQ
GYTTQEECDL LGLGVSSISQ IGDCYAQNQK DIRPYYEAID KEGHALWKGC SLNRDDEIRR
VVIKQLICHF ELDMAKIDEK LGINFETYFA EDLKLMQTFI DDKLVEIVDR QITISPTGRL
LIRNICMCFD LYYRQKARQQ QFSRVI