| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_0021 |
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| Symbol | fadB |
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| ID | 4844296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | - |
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| Start bp | 22830 |
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| End bp | 24980 |
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| Gene Length | 2151 bp |
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| Protein Length | 716 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640117233 |
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| Product | multifunctional fatty acid oxidation complex subunit alpha |
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| Protein accession | YP_001048426 |
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| Protein GI | 126172277 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | [TIGR02437] fatty oxidation complex, alpha subunit FadB |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000906563 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCTACC AAAGTCCTAC AATTCAGGTT GAGTTACTCG AGGATAATAT TGCCAAGCTG
TGCTTTAACG CACCCGGTTC GGTGAACAAA TTCGACAGAG AAACCCTCAC CTCGCTCGAT
GCGGCATTAG ACAGCATCAA GCAAGATTCT AATATCAAAG CGTTAGTGCT GACCTCAAGT
AAAGATACCT TTATTGTGGG CGCCGACATT ACCGAATTTT TAGGCCTGTT CGCACAAGAT
GACGCCGTAT TGCTCTCTTG GGTTGAACAA GCTAACGCAG TCTTCAACAA ACTCGAAGAC
TTGCCTTTCC CAACCGCATC AGCAATCAAA GGCTTTGCCT TAGGTGGCGG CTGTGAAACC
ATTCTGGCAA CCGATTTCCG CATCGCAGAC ACCACAGCCA AAATCGGTTT ACCTGAAACT
AAACTCGGCA TCATCCCAGG CTTTGGCGGC ACAGTTCGTC TGCCACGTGT GATTGGTGCA
GATAACGCAC TTGAGTGGAT TACCACAGGT AAAGACCAAC GCGCTGAAGA TGCACTGAAA
GTCGGCGCTG TTGATGCCGT GGTTGCACCA CAAGCGTTAG AAGCTGCTGC GATTCAAATG
CTGAAAGATG CTGTTGCTGA AAAGCTGGAT TGGCAAGCAC GTCGTAACCG TAAACTGTCT
GCACTAACAC TGCCAAAACT TGAAGCTATG ATGTCATTCA CCACAGCCAA AGGCATGGTG
TTTGCGGTTG CGGGTAAACA CTACCCTGCA CCAATGGCTG CAGTAAGCGT GATTGAGCAA
GCATCGACTA AAGGTCGTGC TGAAGCATTA CAAATCGAAC ATCAAGCCTT TATCAAGCTA
GCGAAAACCG ACGTTGCTAA GGCACTTATC GGTATTTTCC TTAATGATCA ATTTGTTAAA
GGTAAAGCGA AGAAAGCCGG CAAGTTAGCG AAAGAAGTCA ACAACGCGGC CGTATTAGGC
GCAGGCATTA TGGGCGGCGG CATCGCTTAC CAAAGCGCCA GCAAAGGCAC ACCGATTGTC
ATGAAAGACA TTGCCCAGCC AGCATTAGAT TTAGGCCTCA ATGAAGCCGC TAAACTGTTG
TCTGCCCAAG TCGCCCGTGG CCGTTCAACG CCAGAAAAAA TGGCCAAAGT GCTGAACAAC
ATCACGCCTT CGTTAGATTA TGCCGCGATT AAACACAGTG ATGTTGTCGT TGAAGCCGTT
GTTGAACATC CAAAAATCAA AGCACAGGTT TTAGCCGAAG TTGAAGGCTA TGTGAGTGAA
GATGCAATTA TCGCGTCAAA CACTTCAACA ATTTCAATCA ACTTGCTCGC TAAGAGCATG
AAGAAACCTG AGCGTTTCTG CGGTATGCAT TTCTTCAACC CAGTGCACAA AATGCCGTTG
GTCGAAATTA TCCGTGGCGA ACACAGCTCT GAAGAAACCA TCGCCTCTGT TGTGGCTTAT
GCCAGCAAAA TGGGCAAGAC CCCAATCGTT GTTAATGATT GCCCCGGCTT CTTCGTTAAC
CGCGTACTCT TCCCTTACTT TGCAGGCTTT AACGGCTTAC TTGCCGAAGG TGGCGACTTT
GCTGCAATCG ACAAAGTGAT GGAAAAACAA TTCGGTTGGC CAATGGGTCC AGCTTACCTG
CTCGACGTAG TAGGTTTAGA CACAGGTCAT CACGCCCAAG CTGTAATGGC TGAAGGTTTC
CCTGATCGCA TGGGTAAATC TGGTACTGAC GCGATTGATG TGATGTTTGA GAACAAACGT
CTTGGCCAGA AAAATGGCAA AGGTTTCTAT GTCTATTCAG TCGATAGCCG TGGCAAGCCG
AAGAAAGATG TCGATCCAAC AAGCTACGGT CTATTGAAAG ATGCCTTTGG CGAGTTAAAA
GCCTTTGAAG CCGATGACAT TATTGCTCGT ACTATGATCC CTATGATCAT CGAAACCGTG
CGCTGTTTAG AAGAAGGTAT TGTCGCATCG CCTGCCGAAG CGGATATGGG CCTAGTTTAT
GGCTTAGGTT TCCCGCCATT CAGAGGCGGC GTATTCCGTT ACTTGGATAC CATGGGTGTC
GCAAATTTTG TGGCCTTAGC AGACAAATAC GCTCACTTGG GCGGTCTGTA TCAAGTCACA
GATGCGATGC GCACATTAGC AGCCAATAAC GGTAGCTACT ACCAAGCCTA A
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| Protein sequence | MIYQSPTIQV ELLEDNIAKL CFNAPGSVNK FDRETLTSLD AALDSIKQDS NIKALVLTSS
KDTFIVGADI TEFLGLFAQD DAVLLSWVEQ ANAVFNKLED LPFPTASAIK GFALGGGCET
ILATDFRIAD TTAKIGLPET KLGIIPGFGG TVRLPRVIGA DNALEWITTG KDQRAEDALK
VGAVDAVVAP QALEAAAIQM LKDAVAEKLD WQARRNRKLS ALTLPKLEAM MSFTTAKGMV
FAVAGKHYPA PMAAVSVIEQ ASTKGRAEAL QIEHQAFIKL AKTDVAKALI GIFLNDQFVK
GKAKKAGKLA KEVNNAAVLG AGIMGGGIAY QSASKGTPIV MKDIAQPALD LGLNEAAKLL
SAQVARGRST PEKMAKVLNN ITPSLDYAAI KHSDVVVEAV VEHPKIKAQV LAEVEGYVSE
DAIIASNTST ISINLLAKSM KKPERFCGMH FFNPVHKMPL VEIIRGEHSS EETIASVVAY
ASKMGKTPIV VNDCPGFFVN RVLFPYFAGF NGLLAEGGDF AAIDKVMEKQ FGWPMGPAYL
LDVVGLDTGH HAQAVMAEGF PDRMGKSGTD AIDVMFENKR LGQKNGKGFY VYSVDSRGKP
KKDVDPTSYG LLKDAFGELK AFEADDIIAR TMIPMIIETV RCLEEGIVAS PAEADMGLVY
GLGFPPFRGG VFRYLDTMGV ANFVALADKY AHLGGLYQVT DAMRTLAANN GSYYQA
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