Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_2482 |
Symbol | |
ID | 4848145 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | + |
Start bp | 2461069 |
End bp | 2461785 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640117192 |
Product | ABC transporter-related protein |
Protein accession | YP_001048385 |
Protein GI | 126180420 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.988214 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATAGAGG CAACCGAACT CACGAAGAAC TACGGCAACG TCACCGCGGT GAACAGGGTA TCGTTCTCCG TTGCGGAAGG GGAGCTCTTC GGCCTGCTCG GGCCGAACGG CTCGGGGAAG ACGACGATGA TCCGGATGCT GACCGGGCAG ATTCCGCCGA CCTCCGGGTC GGCCCGGGTG ATGGGGCTCG ATGCGGCGAA GGATCCCATC GGGGTCCGGG GGCTCGTCGG GATCATCCCC GAACAGGAGA CGCCGCCGAG TTTCCTCACC GCGGAGGAGT ACCTCCGTTT CGTGGCCAGC ATCCGAAACC TCGACTCGGT GGACGAGCGG TGCGACCGCT GGTTCGACCT GCTGGAGTTT GGCGACAAGC GGGACGTCCT CTGCAAGGAT CTCTCCCGGG GCACCCGGCA GAAACTGATG TTTGCGCAGG CGTTCCTCCA CGAACCAGAG CTCGCCCTCA TCGACGAGCC GCTGATCAAC CTGGACCCCA TCATGCAGCG GACGGTCAAA GACTTCCTGC GCGAGTATGT CCAGGGCGGC GGGACCGTCT TCTTCTCCAC CCATATCCTC GAGATCGCCG AAGAGATCTG CGACCGTATC GGGGTCATCC ACAACGGCAG GATCCTTCAC TCCGGCCCGG TCGAAGACCT CGTCGGATCG GGCCGGCACC TCGAGTCCTT CTTCCTCGAC CTGGTCAAGG GTGATGCCGG TGCCTGA
|
Protein sequence | MIEATELTKN YGNVTAVNRV SFSVAEGELF GLLGPNGSGK TTMIRMLTGQ IPPTSGSARV MGLDAAKDPI GVRGLVGIIP EQETPPSFLT AEEYLRFVAS IRNLDSVDER CDRWFDLLEF GDKRDVLCKD LSRGTRQKLM FAQAFLHEPE LALIDEPLIN LDPIMQRTVK DFLREYVQGG GTVFFSTHIL EIAEEICDRI GVIHNGRILH SGPVEDLVGS GRHLESFFLD LVKGDAGA
|
| |