Gene Memar_2467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_2467 
Symbol 
ID4846463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp2445696 
End bp2446052 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content64% 
IMG OID640117177 
Productanti-sigma-factor antagonist 
Protein accessionYP_001048370 
Protein GI126180405 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGGGC ACTTCGAGAT CACCGAGGAA AAGGCCGGCA CCGTCGATAT CGTCACGATG 
AAAGGGCGGC TGGACGCCGG CTCTTCGGAG ACGGCACAGG AGCGGATCAA CAGGGTGCTC
GACGCCGGAG GGAGGAACCT CCTCGTCAAC CTCTGCGACC TCGACTATAT CAGCAGCTCC
GGGCTCCGGG TGCTGCTTGC CACGCTGAAG CGGCTGAAGA CCAACGGCGG GGCGCTCCGG
ATTGCCTGCG CACAGCCGCA GATCCTCGAG GTCTTCACCA TGGCGGGGTT CCACCGGATC
TTTTCGCTCT CTCCCGACGA GGCAACTGCG CTTGCCGGTT TTCCGGCGGG ATCCTGA
 
Protein sequence
MSGHFEITEE KAGTVDIVTM KGRLDAGSSE TAQERINRVL DAGGRNLLVN LCDLDYISSS 
GLRVLLATLK RLKTNGGALR IACAQPQILE VFTMAGFHRI FSLSPDEATA LAGFPAGS