Gene Memar_2464 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_2464 
Symbol 
ID4847026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp2441004 
End bp2442830 
Gene Length1827 bp 
Protein Length608 aa 
Translation table11 
GC content64% 
IMG OID640117174 
Producthypothetical protein 
Protein accessionYP_001048367 
Protein GI126180402 
COG category[S] Function unknown 
COG ID[COG4907] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGATAA CCGAGCGGCA ACAGATACTC ACCCTCCTCG CCGTCACCCT GGTTATCGGG 
GTGCTGGCGG TCGTCGGAGC GAATGCGCTC CCTGCCCTCT TCCGGGGGAA TCTTGAGGTC
GAGCAGTATG AAGCCGTCTT CTGCGAGAAC GGAACCCTGG TCGAGCGCTA CACCTACGAC
GTCCGCGCCG CAGGCGAGTA CCGGATGCTC TTCCGGTACT GGGACGCACC GCTTGCTTTT
TCCGCAATCG ATCGGCCGCA TATCGAGTTT GCCGGGATGG CTGCTCCGCC CGGAACCATC
GGCTATGTCA AAGATCACTG GGGTGAGGTG CGCCCGGCCG CGGGGAGCCC GACCACCTCG
GATATCGCGG CGATCCGGAA TCTTGCGTTC GATAGCGAAG TGGGCCTCTA CAACCCCGAC
TACTTCGCCC CGGGCACCTA TACGGTGGAG TACCGCTACA TCGTCCGGCC GCCGATCGAG
TACGACGAGG AATGGGCGCA CCTGAATCTG AAACTCGTGG ACGAGCACGT CTCCTTCCGC
AACCTCCGGG TCACGCTGCC GTTCGCCGGG CAGATCGAGG AGGTCTACAC GCATCCCCCG
ACCCTTGAGG TCGAGCGGAC GGCGGAGTCC GTCGTCGTCA CGGGGGCCGC CCCGCAGGAC
GATGCGCTGA ATATCGAGAT GGTTCTCGAT CCGGCGTTCA TGGAAGAGAT CGATGGGTTC
CCCGGGTACG TCCCGGACGT GCGGCAGCAG GCAGCCGACG CCAACCGCTG GCCCCCGATC
CTGTATGCGG CGGCGAAGAT CCTCTATGGC CTTGCGACCG TCCTCGTCCT CGCGATGCCG
TTCATCCTCC TCGGCGTCTA CCTCCGCTAC GGCAGGGAAA AACCGTTCAC GGTGCCGGAG
TACCTGAGTT TCACGCCGAA CACCGCGCTC AAACCCTGGC AGGTGAACCT CCTCTTCAAG
GGCGACGCAC TTGATTACGA CGAGAACGGG TTCTACGCGA CGATCCTCGA TCTTCACCGG
CAGAAGAAGA TCGTGGTGAC CGAAAAGCCG GACGGCAAAG GCGTCACGGT CAGGATCGTC
TCGGGGGTGT CGAGCGATCC TTACGAGCAG CGGGTGCTCA ATTTCCTTGG AAACATCGCC
GACGATCACG TCGTGGACAC CGCCGAACTC GAGGAGTTCG CCCGGACCGC CCGGAGGAGC
CCCGGATACC AGCACCGGAT CGTGCAGTAC CAGCAGTCGC TTGCCGGCCT GACCCGGGAC
GTGGACACTT CGCTCGCCCA CCGGTACATC AAGGACGGGC GGACGATGAT CCTCCCGCTC
GTCTTCCTCG GCGCCATCCC CTGCGGGCTA TCCATCCTCG CGTTCATCCT CGCGCCGGGC
GCGGCCAATC TCCTGATCCC GGCCGGCACC CTCGCCTTCA TCGCCGCGGT CCAGGTCGGG
ATCGCGGCCA TCTTCCCCTC GACGCTGTTT GGGTTCTGGA AAGGCGACCA TTACAAGGAG
AAACTCGAGT GGGACGCGTT CTCCTACTTC CTCTCGGATC TCGCGCTGAT CCGGCAGTAC
TCCCCTGCCG ACCTCTCGAT GTGGGGAGAG TGGCTGGTCT ACGGGACGGC GCTCGGCATC
GGGGATAAGG TGGAGCAGGC GATGAAGAAC CTGCATATCA ACATCCCGGA TGTCGGGGTG
CCGCTCTACT CGAACATGCC GGTGATCTTT GCCCCGATCG TCCTCTACTC CCCGCCGTCG
AGTGGCGGCG GCAGCGGCGG GTTCGGTGGG GGCGGGTCGT TCGGCGGCGG CGGCGGCTTT
GGCGGCGGTG GCGTCGGGGG GCGCTGA
 
Protein sequence
MRITERQQIL TLLAVTLVIG VLAVVGANAL PALFRGNLEV EQYEAVFCEN GTLVERYTYD 
VRAAGEYRML FRYWDAPLAF SAIDRPHIEF AGMAAPPGTI GYVKDHWGEV RPAAGSPTTS
DIAAIRNLAF DSEVGLYNPD YFAPGTYTVE YRYIVRPPIE YDEEWAHLNL KLVDEHVSFR
NLRVTLPFAG QIEEVYTHPP TLEVERTAES VVVTGAAPQD DALNIEMVLD PAFMEEIDGF
PGYVPDVRQQ AADANRWPPI LYAAAKILYG LATVLVLAMP FILLGVYLRY GREKPFTVPE
YLSFTPNTAL KPWQVNLLFK GDALDYDENG FYATILDLHR QKKIVVTEKP DGKGVTVRIV
SGVSSDPYEQ RVLNFLGNIA DDHVVDTAEL EEFARTARRS PGYQHRIVQY QQSLAGLTRD
VDTSLAHRYI KDGRTMILPL VFLGAIPCGL SILAFILAPG AANLLIPAGT LAFIAAVQVG
IAAIFPSTLF GFWKGDHYKE KLEWDAFSYF LSDLALIRQY SPADLSMWGE WLVYGTALGI
GDKVEQAMKN LHINIPDVGV PLYSNMPVIF APIVLYSPPS SGGGSGGFGG GGSFGGGGGF
GGGGVGGR