Gene Memar_2421 details

Gene Information

• Locus tag: Memar_2421
• ID: 4846303
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanoculleus marisnigri JR1
• Kingdom: Archaea
• Replicon accession: NC_009051
• Strand: -
• Start bp: 2400587
• End bp: 2402617
• Gene Length: 2031 bp
• Protein Length: 676 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 640117129
• Product: blue (type1) copper domain-containing protein
• Protein accession: YP_001048324
• Protein GI: 126180359
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG2133] Glucose/sorbosone dehydrogenases

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATATCCG TCCTCGTGCT CCTTGCCCTG GCAGGCGTTG CCGGGGCCGG GGTGTACCCG 
GACGGTGGAA CCGGCCTCAC GCAGACTTCC GCTCCCGAAG AAGAGGATAT AACGGCCTTT 
GCCGGAAACC TGACGAACGC CGGGTCGGCG TACGCGGCGG AACTCCTGAA CAACACCTCG 
TTCACCCGAT TTGCCGGGGA GAACGAGACG ATTAACGTGA GTCTCGAACT CGTAGCCGAA 
GGCCTCGTCG CGCCGCTGAT GCTCACGGAT GCCGGCGACG GCACGGGCAG GCTCTTTGTC 
GTCGACCAGG TCGGGACGGT CTCGATCATC GACGAGAACG GCACACTCAT CAAGGAACCG 
TTCCTCGACG TCCGCGACCG GATGGTCAAC CTCACCCCGT CGTTCGACGA GCGCGGGCTC 
CTCTCGATCG CCTTCCACCC CGACTTTGGG GAGAACGGGC GGGTATTTGC ATTCTACAGC 
ACGCCCCTCC GCGAGGAGGC GCCTGATGAC TGGGACTGCA CGAACCGCCT CTCCGAGTTC 
AAGGTCGACC CCGCAAACCC CGACCAGGTC AACGCGACCT CGGAGAAGAT CTTAATGGAG 
ATCGACAAAC CGCAGTCCAC CCACAACGGC GGGAGCATCG CCTTCGGCCC GCGTGACGGC 
TACCTCTACG TGCCGCTCGG GGACGGGGGC GCGGCGAACG ACAACGGCAC CGGCCACACC 
CCGGAGATCG GGAACGCCCA GGACCTGACG AAGATCTACG GCAGCGTGCT CCGGATCGAC 
GTGGACAACG TCACCGCCAG GAACGTGACG GAGCCGCTGG AGAACGCCAC CCGGACGACG 
GCGGCGGGTC CCCTCTACGG AATCCCGGCG GACAACCCGT TCGTCGCGAA CGAAAGCATC 
CCGCCCGAGA TCTACGCCTA CGGTCTCCGG AACCCGGCGT ACATCACGTT CGACGCCGAA 
GGCAACCTCT TTGTGGGGGA TGCCGGCCAG AATCTCTTTG AGGAAGTCTC GCTTGTGGTG 
AACGGCGGCA ACTACGGGTG GCGCCTCCGG GAGGGAACCC ACTGCTTCGA TCCGGAAAAC 
CCCCAAACGC CCCCGGCGAC CTGCCCGGCA AACGGCTCCT CCGGCGAACC CCTGATCGGC 
CCCGTCATCG AGGGCGGGCA TGACCTGGGT GTCGTCTTCG TCGGCGGCCG GGTCTACAAC 
GGCACGGCGC TCCCGGATCT TATGGGACGC TACATCTTCG GCTACTGGAG CACCGGCTTC 
GGCGTCGGGA ACGCCACCCT GCTCGTCGCG ACACCCCCGG CGGGGTGGAA CGCATCGGCG 
TTCCCGGACT CCGCGGAGAA CCTCACTCCC GAAGACGTCG CGATGTGGAG CCTGCAGAGG 
CTCAACGTGA CCGGGACGCC CGCGGGAACC CTGGACGCCT ACCTCCTGGG ATTCGGTGAG 
GATGGAGAGT CGGAACTCTA CGCGCTCACG TCCAAAGACG CGGGCCCGGA CGCCGCCAAT 
GCGACCGGGA CGGTCTGGAA GATCGTCCCG GCGAACGTGA CGGAGACGCC GACTCCGACG 
GCGAACGTGA CGATGGTTCC GGGTGCGGAT ATGACTGCAA CGCCGACCGT GACCGGGAAT 
GTGACCGTAA CGCCGACTGA AAACGTTACG GCGGTTCCGA CTGCGAACGT GACCACGACA 
CCTGCCGTGA CCACGAACGT GACCGCAATC CCGACTGGAA ACGTTACGCC GGCCGCGGCC 
GGGAACGTGA CCGTGGGGGT TGTGGCCGAA GCCTTTGCCT TCAACACGTC CACCATCACC 
GTCCCGGCGG GGGCGAACGT GACGATGGTC TTCGATAACC AGGATACCGG CATCCCGCAC 
AACGTCGCGG TCTACACGGA CTCTTCCGTG GCCGAGGAGA TCTTCGTCGG CGAGATCATC 
GACGGCCCGG GCCAGGTGAC CTACACCTTC ACGGCGCCGG AGGAGTCCGG AACCTACTAC 
TTCCGGTGCG ACGTCCATCC CCCGATGGAC GGAGAGTTCG TTGTTGAGTA G 

 

Protein sequence

MISVLVLLAL AGVAGAGVYP DGGTGLTQTS APEEEDITAF AGNLTNAGSA YAAELLNNTS 
FTRFAGENET INVSLELVAE GLVAPLMLTD AGDGTGRLFV VDQVGTVSII DENGTLIKEP 
FLDVRDRMVN LTPSFDERGL LSIAFHPDFG ENGRVFAFYS TPLREEAPDD WDCTNRLSEF 
KVDPANPDQV NATSEKILME IDKPQSTHNG GSIAFGPRDG YLYVPLGDGG AANDNGTGHT 
PEIGNAQDLT KIYGSVLRID VDNVTARNVT EPLENATRTT AAGPLYGIPA DNPFVANESI 
PPEIYAYGLR NPAYITFDAE GNLFVGDAGQ NLFEEVSLVV NGGNYGWRLR EGTHCFDPEN 
PQTPPATCPA NGSSGEPLIG PVIEGGHDLG VVFVGGRVYN GTALPDLMGR YIFGYWSTGF 
GVGNATLLVA TPPAGWNASA FPDSAENLTP EDVAMWSLQR LNVTGTPAGT LDAYLLGFGE 
DGESELYALT SKDAGPDAAN ATGTVWKIVP ANVTETPTPT ANVTMVPGAD MTATPTVTGN 
VTVTPTENVT AVPTANVTTT PAVTTNVTAI PTGNVTPAAA GNVTVGVVAE AFAFNTSTIT 
VPAGANVTMV FDNQDTGIPH NVAVYTDSSV AEEIFVGEII DGPGQVTYTF TAPEESGTYY 
FRCDVHPPMD GEFVVE