| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_2399 |
|---|
| Symbol | |
|---|
| ID | 4846899 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | + |
|---|
| Start bp | 2381828 |
|---|
| End bp | 2383426 |
|---|
| Gene Length | 1599 bp |
|---|
| Protein Length | 532 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640117109 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001048304 |
|---|
| Protein GI | 126180339 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.992089 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACCT GGACATCGCA TGCCATCCTC GCGGTCGCCA CCGTCGCGAC CCTTCTCCTC
CTCGCGGGAG AAGCGACCGC TCCGGTCCTC TACACTGCGG CAAACATCTC GACCGCTGCC
CACGCCGACC CCACAACGAT CGAGAAACGA TCCCCGGGCG ACGCCGCCGC CGCCGTCCCG
CTGATGGACG ACCTCCTCGG CGAGACCGGA ACCCTCGCTC TCACGATCCG GCTCAAGGAC
TACGAGAGCG CCGAGCGCGA CCTCGCCCGC TACAGCGAAC TGTCGGCCCG GTTCGACCGG
CTTGTCGTCA CCCTGGACGT CTCCGGCACC GATATCGGCG AATTCCAGCG GAACAACCGA
CAGAACCTTG CCTCCCTTGA GACACTCCTC AACGACACCC GGCGGTTCGA CGACTTACAA
AGGCTTGAGA TCGAAGTCCG GGGAGACGAC GACCAGCACA TGGCCGTCGT CTACGAGGGC
GAGGCCCTCC GGCAGAAGAT GCGGGAGGGG TTTGCCGCCT ACGCGGATCG CGAGGCCACG
ATGACCGGGA TAGCCGGACA CTACAACATC AATGCCACCC CGTATAAGAA GAGCATCGAA
GACTTCGCGG TGATCGCCGA CGCAGCGGAC GACTGGCAGG CGGGGACCAG GGTGGATACA
AAGTCTCCCC TCGACATCGC GGTCGCCCCG GGCGAGGGGC GCTACGGGGA CCTCCTCACG
ATCACCGGGA CTTACACCGG CGGTCTCCCG GGGGCCTCCA TCGAGATCTA CGTCGATAGC
CGGATCGCAG GTAACGTCAG CCTCGACGAG AGCGGTAACT ACATCTACCC CTACCGGATC
GACCGGCTCC TCGCCGGGCC ACACCTCGCC TATGCGACCG CAGGTGCGGT CTACTCAGAT
ATCGCGACGT TCCGGGTCCA CCCGGGCGAT ACCGCCATCA CCCTTGCCCT TGCAGAGGTG
AACCGGACGG CATTCGCCTG TACCGGGAAT CTCACGACCG GGGGAGATCG GCCGGTCGCG
GGCGCCCCCG TCCTCCTCCG GATCGACGAG ACAACCCTGG TCAACACGGA GACCGATCGA
AACGGCACGT ATGCCCGGGA CATCGTCCTC CCCGCCGGGG AACATACCGT CCGTGCTGAG
TTCCACCCTG CAGGATACCC CCTGAACGCC TCCGAAAGCC CGATGGAGAC GACCGTCGTC
CGTGGAGAAG ACCTCTCCCC CCTCCCGTTC GCCGCGGCAG TCGGCGCCGT GCTCGGTACC
GGCTGGTACC TCAGGCGCCG GTATCGTGCG ACGGAGGAGA ATCCTGCCGT GGAGCCGCCT
GACATCGTGG TGGAGGACGA GGCCGTCAAG ACCCCGCCGC AGGTGGAGAT CGCGGGGCTT
CCTCCCCGCG AGGCCGCGAC CATCCTCTTT TGCGCCTTCC GTACCCGGCT CGGCCTCCCC
GAGACGAAGA CCCCGCGCGA TTGCACCCGA CTCTGCCCGG CTCATGCCGG ATTCTTCGAG
CGCTACGAGC GGATCCGGTA CGCGGGAGAG ATCCCGTCGG AGGAGGAACT TCACGCGATG
GAGGGAGAAA CTCTCGGGAG TGATGAAGGT GCGGCGTGA
|
|---|
| Protein sequence | MKTWTSHAIL AVATVATLLL LAGEATAPVL YTAANISTAA HADPTTIEKR SPGDAAAAVP
LMDDLLGETG TLALTIRLKD YESAERDLAR YSELSARFDR LVVTLDVSGT DIGEFQRNNR
QNLASLETLL NDTRRFDDLQ RLEIEVRGDD DQHMAVVYEG EALRQKMREG FAAYADREAT
MTGIAGHYNI NATPYKKSIE DFAVIADAAD DWQAGTRVDT KSPLDIAVAP GEGRYGDLLT
ITGTYTGGLP GASIEIYVDS RIAGNVSLDE SGNYIYPYRI DRLLAGPHLA YATAGAVYSD
IATFRVHPGD TAITLALAEV NRTAFACTGN LTTGGDRPVA GAPVLLRIDE TTLVNTETDR
NGTYARDIVL PAGEHTVRAE FHPAGYPLNA SESPMETTVV RGEDLSPLPF AAAVGAVLGT
GWYLRRRYRA TEENPAVEPP DIVVEDEAVK TPPQVEIAGL PPREAATILF CAFRTRLGLP
ETKTPRDCTR LCPAHAGFFE RYERIRYAGE IPSEEELHAM EGETLGSDEG AA
|
|---|
| |